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scnpilot_p_inoc_scaffold_10077_2

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(762..2762)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraG n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HPV4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 666.0
  • Bit_score: 1188
  • Evalue 0.0
  • rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:EQA99588.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 666.0
  • Bit_score: 1188
  • Evalue 0.0
virD4; type IV secretory pathway VirD4 component similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 668.0
  • Bit_score: 1148
  • Evalue 0.0

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Taxonomy

Sphingobium quisquiliarum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2001
ATGTCGGCCACCAAAATCCTCTGGGGTCAGATCCTCACTGTCTTTCTGATCGTGCTTGCCACCACCTGGGGCGCCACCGAATATGTCGCGTGGTCGCTCGGGTTTCAGGCGCAGCTTGGGCCGCCCTGGTTCACCGTGCTGGACTTTCCCTTTTACGTGCCGCCGTCCTTCTTTTGGTGGTGGTATGCCTATGATGCCTACGCGCCCGGCACCTTCACCGAAGGCGCGTTCATCGCTGCGTCAGGCGGCTTCATCGCCGTCGCGGTCGCGATCGGCATGTCGGTCTGGCGTGCACGCGAAGCGAAAAAGGTAGAAACCTACGGCTCGGCGCGCTGGGCAGGGACGGAAGAAGTCAAATCCGCCGGCCTGCTTGGCTCCGATGGCGTGGTGCTCGGACGCTACGACCGCGACTATCTTCGTCACGATGGGCCGGAGCATGTGCTCTGCTTCGCGCCGACCCGGTCCGGCAAGGGTGTCGGCCTCGTCGTGCCGTCGCTCCTGACTTGGCCAGGCTCTGCCATCGTCCATGACATCAAGGGCGAGAACTGGCAACTGACCGCCGGCTTCCGCGCCCGGCACGGCCGCGTGCTGTTGTTCGATCCGACCAATGCGAAGTCCTCGGCCTACAACCCGCTGCTCGAGGTCCGCCGAGGCGAATGGGAGGTCCGTGACGTCCAGAACATTGCCGATATTCTGGTCGACCCCGAAGGCTCGCTGGAAAAGCGGAACCACTGGGAAAAGACTAGCCACGCGCTGCTGGTCGGGGCGATCTTGCATGTCCTGTACGCTGAGGCAGACAAGACGCTCGCCGGGGTCGCCGCCTTCCTCTCCGACCCTAAGCGGCCGATCGAGTCAACGCTCGCCGCGATGATGACCACCGCACATCGCGGTGATGCCGGCCCGCATTCCGTCATCGCCAGCGCCGCGCGCGAACTGCTGAACAAATCCGACAATGAGCGATCGGGCGTTCTGTCGACAGCCATGTCGTTCCTCGGCCTCTATCGCGATCCGGTCGTCGCAGAAGTGACGCGACGTTGTGATTGGCGTATCGACGATATTGTCGGTGGGAAACGGCCAACCACGCTGTACCTCGTCGTGCCGCCCTCCGACATCGTCAGGACCAAGCCGCTGATCCGCCTGATCCTCAACCAGATCGGGCGACGACTTACCGAGGATCTCAATGCGAAGACGGACCGTCATCGCTTGCTGCTGATGCTCGACGAGTTTCCGGCGCTCGGCCGGCTCGACTTCTTCGAGAGCGCTTTAGCTTTTATGGCGGGTTATGGCCTGAAGGCCTTCCTGATCGCGCAGTCGCTGAACCAGATCGAGAAGGCTTACGGCCCGAACAACTCCATCCTCGACAACTGTCATGTCCGCGTCAGCTTCGCGACCAATGACGAGCGAACGGCCAAACGCGTGTCCGATGCGCTCGGCACCGCCACCGAGATGAAGGCGATGAAGAACTATGCCGGCCATCGGTTGTCGCCTTGGCTCGGTCACCTGATGGTGTCGCGCTCGGAGACGGCCAGGCCGCTGCTCACCCCTGGCGAGGTGATGCAGCTGCCGCCCGCCGACGAGATTGTCATGGTCGCCGGCACCCCGCCGATCCGGGCGAAGAAGGCGCGCTATTACGAGGATATCAGGTTCAACGAACGCATCCTGCCGCCCCCGGCGCTGACCGAACTGAGGGAGGCGCGGGCCGACGACTGGACGAGCCGCCCATTGCCAGCGAAGTCGGAACGTGCGGCCCCTGCGACCCCGACCATGTTTCCGGTCTCCGAAGACGAGGACACGACAGACTCCGAGCGGCGGCGTCAGCCCGAGCTGAGCCAGGCGAAACCGATCGAGACGCAGCTGCCAATCGAGAACGAGTTGGAGATCGACGCGGACCGTGACGACGAGATGGAAACTGCCGCCACCCGAAACCGCCGCATGACCGGGATCATGCAGGGCGTGGCTCGCCAGGTCTCGCTCGACCAGAATGATGGAATGGAGCTCTGA
PROTEIN sequence
Length: 667
MSATKILWGQILTVFLIVLATTWGATEYVAWSLGFQAQLGPPWFTVLDFPFYVPPSFFWWWYAYDAYAPGTFTEGAFIAASGGFIAVAVAIGMSVWRAREAKKVETYGSARWAGTEEVKSAGLLGSDGVVLGRYDRDYLRHDGPEHVLCFAPTRSGKGVGLVVPSLLTWPGSAIVHDIKGENWQLTAGFRARHGRVLLFDPTNAKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNHWEKTSHALLVGAILHVLYAEADKTLAGVAAFLSDPKRPIESTLAAMMTTAHRGDAGPHSVIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRIDDIVGGKRPTTLYLVVPPSDIVRTKPLIRLILNQIGRRLTEDLNAKTDRHRLLLMLDEFPALGRLDFFESALAFMAGYGLKAFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMKAMKNYAGHRLSPWLGHLMVSRSETARPLLTPGEVMQLPPADEIVMVAGTPPIRAKKARYYEDIRFNERILPPPALTELREARADDWTSRPLPAKSERAAPATPTMFPVSEDEDTTDSERRRQPELSQAKPIETQLPIENELEIDADRDDEMETAATRNRRMTGIMQGVARQVSLDQNDGMEL*