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scnpilot_p_inoc_scaffold_10077_3

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(2792..4531)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HJR0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 579.0
  • Bit_score: 1110
  • Evalue 0.0
  • rbh
Type VI secretion protein {ECO:0000313|EMBL:EQA99589.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium q similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 579.0
  • Bit_score: 1110
  • Evalue 0.0
virD2; type IV secretory pathway VirD2 component similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 584.0
  • Bit_score: 1021
  • Evalue 1.10e-295

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Taxonomy

Sphingobium quisquiliarum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGTCCGATGAGCGCGAGTTCCGCGTCCGGCCCGGCCGCATCCGCTCCTCCGGTGCGCAGCGGGCCAAGCCGTTCATCGCGCAGGCGCTGGCGGCGGCGAAGAAGGCTGGCGGCGGCGTATCGCGCTCGGGCCGTATCGTGCCCGGCAACCGCTCGCGCTTCGGGCACGGCCAGCGCGCCAGCATCCAGGCGAACCGCCTCATCACTTCACGCTCGCGCGGCGCCGTCATCAAAGCGCGCGTCGTGCGCCATTCGGCCCGTACCGCACCGCTTGGGCAGCACCTCAACTATCTGCGCCGCGAGGGCGTGACCCGCGACGGGGAAAAGGCCCGCCTGTTCGGGCCGGGAAGCGAAAACGCGGATGCCGGCGCCTTCGCCGAGCGCTGCCAGGACGACCGGCATCATTTCCGCTTCATCGTCTCGCCCGACGACGCGCTGGAAATGTCCGATCTCAAATCCTTCACCCGCGATCTCGTCGAGCAGATGGAAAAGGATCTCGGCACCCGGCTCGACTGGGTGGCGGTCGATCATTGGAACACCGAGCACCCGCATGTCCATCTGATCGTGCGCGGGGTGCGTGACGACGGCCAGGACCTCGTCATCGCGCGCGACTACATCAAGGAAGGGATGCGCGACCGGGCGCGCGATCTCATCACCCAGGAACTGGGGCCACGCACCGACCTCGACATCCGCCGCACCCTCGAGCGACAGATCGAAACGGAACGCTGGACCCAACTCGACCGTCAGCTTGCCCGCGACGGGCGCGATACCGGCGTCATCGACCTCGCGCCTGTTCCGGGCCAGCAGCCCGACGAGTTCCACGCCTTGAAGGTCGGACGGCTGCGCAAGCTCGAAACCCTCGGTCTCGCCAGCCAGGTCGGCAACGCGCAATGGTTCATCAAGCCGGAAGCCGAGAAGACGCTGCGTGAGCTGGGCGAACGTGGCGACATCATCAAGCGGATGCACAAGGCGCTGACGGAACGCGGTATCGACCGCGGCTCCACCAACTATGTCCTGGCGGCCGAAAGCCTCGATCTGCCCGTCGTCGGGCGGCTGGTCGAACGCGGTCTCGATGACGAGCTGAACGGCACGGCCTACGCCGTGGTGGATGGCGTGGACGGACGCACCCACCACATCAAGCTGCCCGACCTCGACGCGGCCGGCGACAGCGCGCCGGGCTCGATCGTCGAGCTCAGAAAGTTCGATGACGCGCGTGGCCAGCGTCGCGTCGCGCTCGCCGTGCGCTCCGATCTCGACATTGATGCTCAGGTCACGGCGTCGGGCGCCACCTGGCTTGATCGGCAGAACATTGCACGCGAGCCGGTCGCTCTCTCGGAAAGCGGCTTCGGCGCCGAGGTGCGGCAAGCCATGTCCGCCCGCGCTGAGCATCTGGTCGAACAGGGTCTTGCCGAACGGCAGGGCCAGCGCATCAGCTTCGGTCGCAACTTGATCGACACGTTGCGCCACCGGGAACTGGAGGCGGCTGGCGACAAGCTCGCCACCGAGATCGGCCAGCCCTTCAACCGGTCAGGCAGCGGCGAATATGTCGCCGGCACCTATCGCCAGCGCCTCACGCTCGCCTCCGGCCGCTTCGCCATGATCGACGACGGGCTCGGTTTCCAACTCGTGCCCTGGACGCCCTCGCTCGAAAAGCAGCTCGGTCGCCACGTCTCCGGCGTCGCCCGTGACGACGGCGGTATCGACTGGAGCTTTGGCCGTAAGCGGGGGCTCGGCCTCTAA
PROTEIN sequence
Length: 580
MSDEREFRVRPGRIRSSGAQRAKPFIAQALAAAKKAGGGVSRSGRIVPGNRSRFGHGQRASIQANRLITSRSRGAVIKARVVRHSARTAPLGQHLNYLRREGVTRDGEKARLFGPGSENADAGAFAERCQDDRHHFRFIVSPDDALEMSDLKSFTRDLVEQMEKDLGTRLDWVAVDHWNTEHPHVHLIVRGVRDDGQDLVIARDYIKEGMRDRARDLITQELGPRTDLDIRRTLERQIETERWTQLDRQLARDGRDTGVIDLAPVPGQQPDEFHALKVGRLRKLETLGLASQVGNAQWFIKPEAEKTLRELGERGDIIKRMHKALTERGIDRGSTNYVLAAESLDLPVVGRLVERGLDDELNGTAYAVVDGVDGRTHHIKLPDLDAAGDSAPGSIVELRKFDDARGQRRVALAVRSDLDIDAQVTASGATWLDRQNIAREPVALSESGFGAEVRQAMSARAEHLVEQGLAERQGQRISFGRNLIDTLRHRELEAAGDKLATEIGQPFNRSGSGEYVAGTYRQRLTLASGRFAMIDDGLGFQLVPWTPSLEKQLGRHVSGVARDDGGIDWSFGRKRGLGL*