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scnpilot_p_inoc_scaffold_3622

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3622_1
Physcomitrella patens, Physcomitrella, Funariales, Funariidae, Streptophyta, Viridiplantae

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783..1409
DNA (627bp) protein (209aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9STI4_PHYPA
Predicted protein {ECO:0000313|EMBL:EDQ65454.1}; TaxID=3218 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physco
hypothetical protein
scnpilot_p_inoc_scaffold_3622_2
unknown

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1493..1717
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3622_3
Polysphondylium pallidum, Polysphondylium, Dictyosteliida, Eukaryota

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1827..2213
DNA (387bp) protein (129aa)
WD40 repeat-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3BVR5_POLPA
WD40 repeat-containing protein {ECO:0000313|EMBL:EFA74568.1}; TaxID=13642 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium.;" source="Polysphondylium pallidum (Cellular slime
WD40 repeat-containing protein
scnpilot_p_inoc_scaffold_3622_4
Cricetulus griseus, Cricetulus, Rodentia, Mammalia, Chordata, Metazoa

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2709..3074
DNA (366bp) protein (122aa)
Exosome complex component RRP43-like protein {ECO:0000313|EMBL:ERE89686.1}; EC=3.1.13.- {ECO:0000313|EMBL:ERE89686.1};; TaxID=10029 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleo
EXOSC8, CIP3, EAP2, OIP2, RP11-421P11.3, RRP43, Rrp43p, bA421P11.3, p9; exosome component 8 (EC:3.1.13.-); K12586 exosome complex component RRP43
Exosome component 8 n=1 Tax=Mus musculus RepID=Q6PCW8_MOUSE
scnpilot_p_inoc_scaffold_3622_5
Caligus rogercresseyi, Caligus, Siphonostomatoida, Copepoda, Arthropoda, Metazoa

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3188..3778
DNA (591bp) protein (197aa)
PREDICTED: exosome complex component RRP43 n=1 Tax=Alligator sinensis RepID=UPI0003C292C8
similar to Exosome component 8; K12586 exosome complex component RRP43
Exosome complex exonuclease RRP43 {ECO:0000313|EMBL:ACO11735.1}; TaxID=217165 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Maxillopoda; Copepoda; Siphonostomatoida; Caligidae; Caligu
scnpilot_p_inoc_scaffold_3622_6
unknown

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4116..4583
DNA (468bp) protein (156aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3622_7
Eimeria brunetti, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

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comp(5469..6869)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Eimeria brunetti RepID=U6LS79_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ51434.1}; TaxID=51314 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeri
scnpilot_p_inoc_scaffold_3622_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(6954..7586)
DNA (633bp) protein (211aa)
hypothetical protein ; K03649 TDG/mug DNA glycosylase family protein [EC:3.2.2.-] Tax=RBG_16_Chloroflexi_68_14_curated
Mismatch-specific thymine-DNA glycosylate n=1 Tax=Beauveria bassiana (strain ARSEF 2860) RepID=J4WLT0_BEAB2
DNA methylase
scnpilot_p_inoc_scaffold_3622_9
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7987..8277
DNA (291bp) protein (97aa)
Endoribonuclease L-PSP n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I8M2_9CLOT
Endoribonuclease L-PSP {ECO:0000313|EMBL:ETA82560.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
scnpilot_p_inoc_scaffold_3622_10
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8379..8606
DNA (228bp) protein (76aa)
endoribonuclease L-PSP n=1 Tax=Rhizobium giardinii RepID=UPI0003814EDE
endoribonuclease L-PSP protein
Endoribonuclease {ECO:0000313|EMBL:KEC80357.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="S
scnpilot_p_inoc_scaffold_3622_11
unknown

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comp(9217..9429)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying 11 items

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