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scnpilot_p_inoc_scaffold_72_curated_120

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 142823..144130

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1349421 species="Bacteria; Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 435.0
  • Bit_score: 703
  • Evalue 2.40e-199
MiaB-like tRNA modifying protein YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 435.0
  • Bit_score: 699
  • Evalue 6.00e-199
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPC5_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 435.0
  • Bit_score: 699
  • Evalue 1.90e-198

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1308
ATGAAGAATAAAACGCTTAAGCAAAACAAGGTTAACATTATCACACTGGGTTGTTCCAAAAATATGGTGGACAGCGAGGTCTTAAGCGGCCAGCTGGTCGCCAATGAAATCGACGTTGCCCACGAAAATGAGCAATCCGATCATAATATTGTCATTGTCAACACCTGCGGCTTCATTGACAAGGCCAAAGAAGAATCCATCAATACCATCCTGGAGCAGACCGCGCTGAAAGAGGCCGGCAAGCTGGACAAGGTATATGTCACCGGCTGTCTCAGCGAGCGGTACAGGGGAGATCTGGCGGCAGAGATACCGGAGGTGGATGCCTGGTTCGGCACCCTGGAGTTACCGCTGATCCTGAAGGAGCTGAACGCGGACTTCAAGAAGGAGCTCCTGGGAGAGCGCATGCTCAGCACCCCGAAACACTATGCCTATCTTAAAATATCCGAAGGCTGTAACAGGACCTGCTCTTTCTGCGCCATTCCCTTAATGAGAGGACAGCACGTCTCCAAAACGATCGAAGAGATCGTGGCGGAAGCCCACGCCCTGGTCAGGAAAGGCGTGAAAGAGATCATGCTGATAGCGCAGGAGCTGACCTATTACGGACTGGACATCTATAAGCAACGCCGCCTGGCAGACCTGCTGCGCGCCGTATCCGATGTGCCGGGCATAGAGTGGATACGGCTGCATTATGCCTATCCGTCCAAGTTCCCTATGGATATCCTGGAGGTCATGAACGAAAGACCCAATATCTGTAAATACCTCGACATGCCGCTGCAGCACTGCAGCGACAATATGCTCAAAGCTATGAAAAGGCAGATCACCCGCGCGGAGATGCTGCAATTAATACAGGACATCAGGTCCAGGGTACCAGGCATAGCGCTTCGCACCACGCTCATCACCGGGTTTCCCGGGGAGACCGAAGCTGATGTGGAAGACCTCAAGGCGTTCCTGGAAGAGGTAAGGTTTGAGCGTGTGGGCATCTTTACCTACTCCCACGAAGAGAATACCTCCGCATATGACCTTCCCGATACGATCCCAGCGGAAGAAAAAGAGCGGCGGGCACAAAGCATTATGGAAGTGCAGCAGGAGATCTCCTTTGAAAAGAACCAGGAGCTTATAGGCAAAACGTTCCGGGTCATAGTAGATAAGAAAGAAGCCGGGCGCTACCTGGCAAGAACAGAATTCGACAGCGTGGAAGTAGATAATGAAGTGATCATCCATACTTCCGAAAAATTATATCCCGGTGATTTCGTTACCGTAAAGATCACCAGGGCATACGATTACGACCTGGAAGCAGAGCTGGTCTGA
PROTEIN sequence
Length: 436
MKNKTLKQNKVNIITLGCSKNMVDSEVLSGQLVANEIDVAHENEQSDHNIVIVNTCGFIDKAKEESINTILEQTALKEAGKLDKVYVTGCLSERYRGDLAAEIPEVDAWFGTLELPLILKELNADFKKELLGERMLSTPKHYAYLKISEGCNRTCSFCAIPLMRGQHVSKTIEEIVAEAHALVRKGVKEIMLIAQELTYYGLDIYKQRRLADLLRAVSDVPGIEWIRLHYAYPSKFPMDILEVMNERPNICKYLDMPLQHCSDNMLKAMKRQITRAEMLQLIQDIRSRVPGIALRTTLITGFPGETEADVEDLKAFLEEVRFERVGIFTYSHEENTSAYDLPDTIPAEEKERRAQSIMEVQQEISFEKNQELIGKTFRVIVDKKEAGRYLARTEFDSVEVDNEVIIHTSEKLYPGDFVTVKITRAYDYDLEAELV*