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scnpilot_p_inoc_scaffold_176_curated_124

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(150091..151776)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 575.0
  • Bit_score: 671
  • Evalue 1.00e-189
Transcription termination factor Rho n=1 Tax=Niabella soli DSM 19437 RepID=H1NTZ1_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 571.0
  • Bit_score: 670
  • Evalue 1.20e-189
transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 583.0
  • Bit_score: 652
  • Evalue 1.40e-184

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Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1686
ATGGCCAAGACTGCAGAGCAACTACAGGATATGATGCTTTTTGAGCTTCGTGACGAAGCTGTACAAAATGGCGTCAGTCCGGACAATTTAACCAGGGAAGCGCTGATTTCAGCAATACTGGAAGCACAGAAGACCGTTCCCGCCAAAACCGCTGCAAGAAAGAAAAGAGCAAGAGTGCCCAAAGCTGCTGATACCGCTGAAAATAAGGAAGACAGCCCTGTACCGGACACAGTACAGCCGGCACCGGAAGAAAAAAGCGATACCGGAACGGAAGCCGCTGCTGCCCCGGCGGCGGAAGCGCCCAAAAAGCCCCTGAAAAAAGCAAGAAAGCCCAAGGCCGCCGCTAAAGACACTGCCGAAGCGGAGAAAGCATTGCTGTTTGATATACCCGAAGCTGATGAGGCCGAAGGTGAAAAAGAAGCCGGTACGGTTCCCGCTCCTGAAGCGGTACTGCCGGAAATCCCGGTTCAGCAGGATAATGCTGCCCCGGAAACGCCGGCCCCCGTGGCTCCCGCGAAAAATGCGAACCCGCAGCAGCATAAGCACAACAGACCCGCGTTCAATATCGAATTTGAAGGCATCATCTTCAGTGAAGGTGTGCTGGAAATGATGCAGGACGGTTACGGCTTTTTAAGAAGCTCCGATTATAATTACTTAAGCTCCCCGGATGATGTGTACGTATCTCCGTCCCAGATCAAATTATTCGGTCTGAAGACCGGTGATACTGTGAAAGGTACGGTAAGGCCGCCCAAGGAAGGAGAGAAATATTTTGCCCTCCTGAAAGTGGAGAGCATTAACGGGCGCAGCCCCGAAGATATCCGTGACAGGGTGCCTTTTGACTACCTGACACCTTTATTCCCTAATGAAAGATTGAATATCGTAGGAAATACGGGAAGCATCAGTGCCCGTATCATAGATATGGTGGCACCTATCGGTAAAGGGCAGAGGGGCCTTATCGTGGCACAGCCCAAGACCGGTAAGACCATGCTGCTGAAAGAAGTAGCTAACGCCATTGCCGCCAACCACCCCGAATGTTACCTGATGATCGTGCTGATAGATGAGCGCCCGGAAGAGGTGACGGATATGCAGCGCAGCGTTAACGCGGAAGTCATTGCCTCTACTTTTGATGAGCCGGCGGAAAAGCACGTCAGGGTATCCAATATTGCCCTGCAGAAAGCCAAGCGCCTGGTGGAAGTGGGCCATGATGTAGTGATTCTGCTGGACTCCATCACCCGTCTTGCCCGTGCGCACAATACGGTAGCTCCCGCTTCCGGAAAGGTGCTGAGCGGTGGTGTGGAGGCCAATGCCATGCAAAAGCCCAAGCAATTCTTCGGTGCCGCCCGTAAGATCGAAAACGGCGGTTCGCTGACCATACTGGCCACGGCCCTGATAGATACAGGGTCCAAAATGGATGAGGTGATCTTTGAAGAATTCAAGGGAACCGGTAATATGGAATTGCAGCTGGACAGGAAGCTGGCCAACAAGCGCGTGTTCCCGGCCATTGACATTGTCAACTCGTCCACGCGCCGTGATGACCTGCTGCACGACAAGGAGACCATGACCCGCCTGTGGATGCTGAGAAACTTTATTGCAGATATGAATGCGGATGAGGCGATGCGCTTTTTACTGAAGCATATCAAATCCACCAAAAATAATGCGGAACTGCTCGCGACCATGAATAAATAA
PROTEIN sequence
Length: 562
MAKTAEQLQDMMLFELRDEAVQNGVSPDNLTREALISAILEAQKTVPAKTAARKKRARVPKAADTAENKEDSPVPDTVQPAPEEKSDTGTEAAAAPAAEAPKKPLKKARKPKAAAKDTAEAEKALLFDIPEADEAEGEKEAGTVPAPEAVLPEIPVQQDNAAPETPAPVAPAKNANPQQHKHNRPAFNIEFEGIIFSEGVLEMMQDGYGFLRSSDYNYLSSPDDVYVSPSQIKLFGLKTGDTVKGTVRPPKEGEKYFALLKVESINGRSPEDIRDRVPFDYLTPLFPNERLNIVGNTGSISARIIDMVAPIGKGQRGLIVAQPKTGKTMLLKEVANAIAANHPECYLMIVLIDERPEEVTDMQRSVNAEVIASTFDEPAEKHVRVSNIALQKAKRLVEVGHDVVILLDSITRLARAHNTVAPASGKVLSGGVEANAMQKPKQFFGAARKIENGGSLTILATALIDTGSKMDEVIFEEFKGTGNMELQLDRKLANKRVFPAIDIVNSSTRRDDLLHDKETMTRLWMLRNFIADMNADEAMRFLLKHIKSTKNNAELLATMNK*