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scnpilot_p_inoc_scaffold_176_curated

Search features with annotation key words

Displaying items 1-30 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_176_curated_1
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

377..943
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z3M9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJS03994.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
scnpilot_p_inoc_scaffold_176_curated_2
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1005..1553
DNA (549bp) protein (183aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CGP8_9RHIZ
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:EJN05469.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
hypothetical protein
scnpilot_p_inoc_scaffold_176_curated_3
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1992..3581
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CAJ74933.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
RmuC-domain-containing protein; K09760 DNA recombination protein RmuC
scnpilot_p_inoc_scaffold_176_curated_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3867..6284
DNA (2418bp) protein (806aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ATP-dependent protease La; K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=1 Tax=Niabella aurantiaca RepID=UPI000381DBA5
scnpilot_p_inoc_scaffold_176_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6401..6829
DNA (429bp) protein (143aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL00_NIAKG
FKBP-type peptidylprolyl isomerase
scnpilot_p_inoc_scaffold_176_curated_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7009..9288)
DNA (2280bp) protein (760aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL11_CHIPD
scnpilot_p_inoc_scaffold_176_curated_7
unknown

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9330..9530
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_8
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9554..9934
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MJP6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KFF07942.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_176_curated_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9993..10562)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL31_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63941.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_176_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10639..10959)
DNA (321bp) protein (107aa)
Rhodanese-like protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNQ7_9SPHI
NADH oxidase {ECO:0000313|EMBL:AHF15215.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
rhodanese domain-containing protein
scnpilot_p_inoc_scaffold_176_curated_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10997..11863)
DNA (867bp) protein (289aa)
Sec-independent protein translocase protein TatC n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWS9_SOLCM
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
twin arginine targeting protein translocase subunit TatC
scnpilot_p_inoc_scaffold_176_curated_12
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11889..12335)
DNA (447bp) protein (149aa)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EAY27544.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EAY27544.1};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034CE8FD
scnpilot_p_inoc_scaffold_176_curated_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12418..13896)
DNA (1479bp) protein (493aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSX9_CHIPD
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ACU59018.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_176_curated_14
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14222..14419
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DQ05_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP97575.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
scnpilot_p_inoc_scaffold_176_curated_15
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14462..16279
DNA (1818bp) protein (606aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000378B548
Cl-channel, voltage-gated family protein {ECO:0000313|EMBL:EOR29899.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
chloride channel protein; K03281 chloride channel protein, CIC family
scnpilot_p_inoc_scaffold_176_curated_16
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16915..18972)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J327_9SPHI
Recombinase {ECO:0000313|EMBL:AIM38152.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
site-specific recombinase Gcr
scnpilot_p_inoc_scaffold_176_curated_17
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19180..20058
DNA (879bp) protein (293aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
malonyl CoA-ACP transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
ACP S-malonyltransferase n=1 Tax=Pontibacter roseus RepID=UPI00037E80EF
scnpilot_p_inoc_scaffold_176_curated_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20163..21518)
DNA (1356bp) protein (452aa)
Thioredoxin domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6V0_PALPW
thioredoxin domaiN-containing protein
Thioredoxin domain-containing protein {ECO:0000313|EMBL:ADQ80444.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_176_curated_19
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21522..22397)
DNA (876bp) protein (292aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI000348674C
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EKD09757.1}; TaxID=459495 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis C1.;"
scnpilot_p_inoc_scaffold_176_curated_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22535..23563)
DNA (1029bp) protein (343aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
D-fructose 1,6-bisphosphatase; K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11]
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGK5_NIAKG
scnpilot_p_inoc_scaffold_176_curated_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23924..24844)
DNA (921bp) protein (307aa)
phosphoribosylaminoimidazolesuccinocarboxamide synthase; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV17_CHIPD
scnpilot_p_inoc_scaffold_176_curated_22
unknown

Not on your lists

comp(25130..25738)
DNA (609bp) protein (203aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_23
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25741..26328)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQ04_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU28691.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
scnpilot_p_inoc_scaffold_176_curated_24
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists

comp(26373..27524)
DNA (1152bp) protein (384aa)
Cell surface protein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCW8_9BACT
Cell surface protein {ECO:0000313|EMBL:EFI16995.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
hypothetical protein
scnpilot_p_inoc_scaffold_176_curated_25
unknown

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comp(27540..28070)
DNA (531bp) protein (177aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_26
unknown

Not on your lists

comp(28164..28646)
DNA (483bp) protein (161aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_27
unknown

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comp(28785..28955)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_28
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29103..29750
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Imtechella halotolerans K1 RepID=I0W727_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EID72193.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_176_curated_29
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29747..30715)
DNA (969bp) protein (323aa)
Arginase/agmatinase/formiminoglutamase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERX7_EMTOG
Arginase/agmatinase/formiminoglutamase
Arginase/agmatinase/formiminoglutamase {ECO:0000313|EMBL:AFK02430.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_p_inoc_scaffold_176_curated_30
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30778..31464)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDB7_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57740.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 1-30 of 191 in total

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