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scnpilot_p_inoc_scaffold_176_curated

Search features with annotation key words

Displaying items 181-191 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_176_curated_181
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(210803..211606)
DNA (804bp) protein (268aa)
orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:ACU59721.1}; EC=4.1.1.23 {ECO:0000313|EMBL:ACU59721.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEZ4_CHIPD
scnpilot_p_inoc_scaffold_176_curated_182
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(211725..212726)
DNA (1002bp) protein (334aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
chorismate synthase; K01736 chorismate synthase [EC:4.2.3.5]
Chorismate synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=AROC_CHIPD rbh
scnpilot_p_inoc_scaffold_176_curated_183
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(212787..213728)
DNA (942bp) protein (314aa)
chromosome partitioning protein ParB n=1 Tax=Segetibacter koreensis RepID=UPI0003697432
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KIC91430.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
parB-like partition protein; K03497 chromosome partitioning protein, ParB family
scnpilot_p_inoc_scaffold_176_curated_184
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(213766..214596)
DNA (831bp) protein (277aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCE3_CHIPD
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACU59526.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_176_curated_185
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

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comp(214689..215369)
DNA (681bp) protein (227aa)
hydrolase n=1 Tax=Niabella aurantiaca RepID=UPI00037F14B5
beta-lactamase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_p_inoc_scaffold_176_curated_186
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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215568..216110
DNA (543bp) protein (181aa)
Putative heme iron utilization protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CF02_9FLAO
Putative heme iron utilization protein {ECO:0000313|EMBL:EJL70056.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; K07226 hypothetical protein
scnpilot_p_inoc_scaffold_176_curated_187
unknown

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216215..216337
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_188
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(216470..218050)
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000375AA27
FAD dependent oxidoreductase; K07137
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACU64699.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_176_curated_189
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(218095..219933)
DNA (1839bp) protein (613aa)
hypothetical protein; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-]
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Bacillus sp. L1(2012) RepID=UPI0003613640
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:AFH63582.1}; TaxID=997761 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
scnpilot_p_inoc_scaffold_176_curated_190
unknown

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comp(220005..220679)
DNA (675bp) protein (225aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_191
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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220855..222516
DNA (1662bp) protein (554aa)
Cobalamin B12-binding domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE89_PEDSD
cobalamin B12-binding domain-containing protein
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:ADY54011.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Displaying items 181-191 of 191 in total

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