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scnpilot_p_inoc_scaffold_176_curated

Search features with annotation key words

Displaying items 151-180 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_176_curated_151
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

176978..182737
DNA (5760bp) protein (1920aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00035F34FA
Uncharacterized protein {ECO:0000313|EMBL:EHO08438.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
DNA helicase
scnpilot_p_inoc_scaffold_176_curated_152
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

182747..183169
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HVD4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59240.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein
scnpilot_p_inoc_scaffold_176_curated_153
unknown

Not on your lists

comp(183582..184307)
DNA (726bp) protein (242aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_154
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

184475..184951
DNA (477bp) protein (159aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Phosphopantetheine adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLP0_9SPHI
scnpilot_p_inoc_scaffold_176_curated_155
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

185202..185852
DNA (651bp) protein (217aa)
translaldolase; K00616 transaldolase [EC:2.2.1.2]
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Transaldolase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUD5_CHIPD
scnpilot_p_inoc_scaffold_176_curated_156
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(186731..187927)
DNA (1197bp) protein (399aa)
DoxX family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUY4_CHIPD
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ACU62893.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_176_curated_157
unknown

Not on your lists

188344..188703
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_158
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(188853..189152)
DNA (300bp) protein (100aa)
Putative sigma-54 modulation protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUF5_CHIPD
sigma-54 modulation protein; K05808 putative sigma-54 modulation protein
Putative sigma-54 modulation protein {ECO:0000313|EMBL:ACU59195.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_176_curated_159
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(189196..190164)
DNA (969bp) protein (323aa)
Tyrosine recombinase XerC n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0G6_9SPHI
xerC; integrase; K03733 integrase/recombinase XerC
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_176_curated_160
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(190197..190448)
DNA (252bp) protein (84aa)
30S ribosomal protein S21 n=1 Tax=Niabella aurantiaca RepID=UPI000368EE6D
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_176_curated_161
unknown

Not on your lists

comp(190501..193773)
DNA (3273bp) protein (1091aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_162
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(193842..195917)
DNA (2076bp) protein (692aa)
Endonuclease MutS2 {ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00084246};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
DNA mismatch repair protein MutS domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLH2_CHIPD
DNA mismatch repair protein MutS domain-containing protein; K07456 DNA mismatch repair protein MutS2
scnpilot_p_inoc_scaffold_176_curated_163
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(196157..197182)
DNA (1026bp) protein (342aa)
Luciferase-like, subgroup n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SD34_PEDSD
luciferase
Luciferase-like, subgroup {ECO:0000313|EMBL:ADY51791.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_p_inoc_scaffold_176_curated_164
unknown

Not on your lists

197224..197358
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_165
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

197355..198221
DNA (867bp) protein (289aa)
Calcineurin-like phosphoesterase n=1 Tax=Polaribacter sp. MED152 RepID=A2U364_9FLAO
calcineurin-like phosphoesterase
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:EAQ40913.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED152.;"
scnpilot_p_inoc_scaffold_176_curated_166
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(198361..198897)
DNA (537bp) protein (179aa)
hypoxanthine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
Hypoxanthine phosphoribosyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR70_CHIPD
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KIC90473.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_p_inoc_scaffold_176_curated_167
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(198930..199409)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035C78CA
FKBP-type peptidylprolyl isomerase {ECO:0000313|EMBL:AKD55238.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
FKBP-type peptidylprolyl isomerase
scnpilot_p_inoc_scaffold_176_curated_168
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(199480..200121)
DNA (642bp) protein (214aa)
Lysine exporter protein LysE/YggA n=1 Tax=Flavobacterium sp. F52 RepID=J1AGE8_9FLAO
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EJG01269.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
scnpilot_p_inoc_scaffold_176_curated_169
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(200246..201586)
DNA (1341bp) protein (447aa)
Trigger factor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQA4_CHIPD
trigger factor; K03545 trigger factor
Trigger factor {ECO:0000313|EMBL:ACU58793.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_176_curated_170
unknown

Not on your lists

201863..202111
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_171
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

202207..202488
DNA (282bp) protein (94aa)
transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI0003608ACE
DNA-binding protein {ECO:0000313|EMBL:AHF15786.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
scnpilot_p_inoc_scaffold_176_curated_172
unknown

Not on your lists

202729..202836
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_173
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(202891..204024)
DNA (1134bp) protein (378aa)
Oxygen-independent coproporphyrinogen-III oxidase 1 {ECO:0000313|EMBL:KHJ38634.1}; EC=1.3.99.22 {ECO:0000313|EMBL:KHJ38634.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002FAA926
scnpilot_p_inoc_scaffold_176_curated_174
unknown

Not on your lists

204177..206171
DNA (1995bp) protein (665aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003769099
scnpilot_p_inoc_scaffold_176_curated_175
unknown

Not on your lists

206331..207005
DNA (675bp) protein (225aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_176
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

207190..207924
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRA7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00029.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_176_curated_177
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

207932..208948
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMM5_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_176_curated_178
unknown

Not on your lists

208969..209124
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_curated_179
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

209186..210064
DNA (879bp) protein (293aa)
Flavin reductase domain protein FMN-binding n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG15_CHIPD
flavin reductase
Flavin reductase domain protein FMN-binding {ECO:0000313|EMBL:ACU57998.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_176_curated_180
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

210203..210814
DNA (612bp) protein (204aa)
WbqC-like family protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BR74_9FLAO
WbqC-like family protein {ECO:0000313|EMBL:EHQ04393.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
hypothetical protein
Displaying items 151-180 of 191 in total

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