ggKbase home page

scnpilot_p_inoc_scaffold_176_curated_158

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(188853..189152)

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma-54 modulation protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUF5_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 97.0
  • Bit_score: 138
  • Evalue 3.00e-30
sigma-54 modulation protein; K05808 putative sigma-54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 97.0
  • Bit_score: 138
  • Evalue 9.40e-31
Putative sigma-54 modulation protein {ECO:0000313|EMBL:ACU59195.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 97.0
  • Bit_score: 138
  • Evalue 4.20e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 300
ATGAACGTACAAATTCAGTCAGTAAATTTTGATATTGATCAAAAGCTGATGGAGCACATTGAGAAAAAGATCGATAAGCTGAATACCTTTCACGATAAGATAACTAGCGTAGAAGTATATTTAAAGCTGGATAGCTTGGGACAGAAGGTAAAAGATAAGGTTGCGGAAATAAAGGTGTATATTCCAAGTTGTTCCCTTTTTGCCAAACATGAATCCAAGGTGTTTGAAGAGTCTTTCGACCTGGCCCTTGATTCTATGGTAGCCCAGATCAAAAAAAGTAAAGAGAAAAGAAGAGCCTGA
PROTEIN sequence
Length: 100
MNVQIQSVNFDIDQKLMEHIEKKIDKLNTFHDKITSVEVYLKLDSLGQKVKDKVAEIKVYIPSCSLFAKHESKVFEESFDLALDSMVAQIKKSKEKRRA*