ggKbase home page

scnpilot_p_inoc_scaffold_32_curated_249

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 276573..277715

Top 3 Functional Annotations

Value Algorithm Source
Superfamily II DNA and RNA helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 371.0
  • Bit_score: 534
  • Evalue 2.90e-149
DEAD/DEAH box helicase n=1 Tax=Riemerella columbina RepID=UPI00035DF797 similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 367.0
  • Bit_score: 534
  • Evalue 7.10e-149
Dead/deah box helicase domain protein {ECO:0000313|EMBL:AFD55635.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 371.0
  • Bit_score: 534
  • Evalue 1.30e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Riemerella anatipestifer → Riemerella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1143
ATGAATTTCGATCAATTAGATTTAATACAACCTATACGCCGGGCCGTTGCCGATGCAGGCTATACAGCCGCTACCGAGATACAGGCCAAGGCCATTCCCCATATACTGAAGGGAAAGGACATTTTAGGATGTGCCCAGACAGGTACAGGTAAAACCGCTGCCTTTGCCATTCCGATATTGCAGCAACTGCAGGCCACCCAGCCCCAGCCTTCGCGCATCCGCGCCCTGGTGCTGACACCAACCCGTGAGCTGGCCCTCCAGATAGAAGAGAGCTTCAATACTTACAGTAAATACCTGGGCATACGCAACCTCTCCATTTTTGGTGGCGTACCGCAGGGCAAGCAGGTAACCGGCCTGAAAAAGGGCGTTGATATCCTTATTGCCACACCGGGCAGGCTGCAGGACCTGATGCAGCAGGGCTACATCAACCTGGGGAGCATAGAGATCCTGGTACTGGATGAGGCAGACCAGATGCTGGACATGGGATTTGTCAACGACGTAAAAAGGATCCTTACACATATCCCCGTATCCAGACAAACACTGTTCTTTTCCGCCACGATGCCTAAAGCCATCCGGAAATTTGCCAATACCATACTGAACCAGCCGGTGGAAGTGTCTGTGACACCCGTATCTTCAACGGCGCAAACTGTTCAGCAATCCGTTTACTTTGTAGAGAAGAAAGAAAAGCCCGGACTGCTTATCCACCTGCTGAATGACAGGTCGATCGCCCGCTCGCTGGTCTTTACACGTACCAAGCACGGAGCTGATAAATTGGTAAAGCAACTGGGGCAGAAAGGCATCTTCGCAGCGGCGATACACGGCAATAAATCACAGAATGCCAGGCAAAGAGCCCTGGAAGACTTCAAGAGCAGCAGGATAAGGGTGCTGGTAGCTACGGATATAGCCGCCAGGGGCATCGACATAGACGAGCTGCCGTATGTGGTCAATTACGAACTGCCCAACGTACCTGAGACCTATGTGCACAGGATAGGACGGACAGGACGTGCCGGCAAGGAAGGTGTGGCAGTCTCCTTTTGCGGTAGTGAGGAGCAGGAAGACCTGCAGAATATACAGAAGCTGATAGGCTTCCGGATGCCTGTAAAAGCCTCTATAACCAATAGCAGGCAATTAATGAATCTTTAA
PROTEIN sequence
Length: 381
MNFDQLDLIQPIRRAVADAGYTAATEIQAKAIPHILKGKDILGCAQTGTGKTAAFAIPILQQLQATQPQPSRIRALVLTPTRELALQIEESFNTYSKYLGIRNLSIFGGVPQGKQVTGLKKGVDILIATPGRLQDLMQQGYINLGSIEILVLDEADQMLDMGFVNDVKRILTHIPVSRQTLFFSATMPKAIRKFANTILNQPVEVSVTPVSSTAQTVQQSVYFVEKKEKPGLLIHLLNDRSIARSLVFTRTKHGADKLVKQLGQKGIFAAAIHGNKSQNARQRALEDFKSSRIRVLVATDIAARGIDIDELPYVVNYELPNVPETYVHRIGRTGRAGKEGVAVSFCGSEEQEDLQNIQKLIGFRMPVKASITNSRQLMNL*