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scnpilot_p_inoc_scaffold_114_curated_140

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(163258..164079)

Top 3 Functional Annotations

Value Algorithm Source
RteC protein n=2 Tax=Bacteroidetes RepID=D7VT63_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 274.0
  • Bit_score: 440
  • Evalue 1.70e-120
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KEQ31130.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 274.0
  • Bit_score: 442
  • Evalue 3.70e-121
Tetracycline regulation of excision, RteC similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 273.0
  • Bit_score: 418
  • Evalue 2.20e-114

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 822
ATGAAAAAAATCCACAACGAAATTCTGAACAAATTGATAACGACAATTGACGAATTAGAATTTGAAAGTGATTTCTCGATACAAAAAACAGAAACTATTATAAAACTCATTATTCAAAGCCTGTCTGATTTAAAGGAATATGTTCTGAAAAATGGCTTTAAAAATACCGATGAAGAAATCCAATTTTTCAAATATCTAAAACCAGCTATTGTTTCCAAACTCATCTATTACAATGCAGTATATAAAATTGAAACAAAAAAGCCTTATGGAGAAAAGCAAACAAAAAATTTTCTGACTAAAGAATTGAACAAACTCAAAAAATTCTTTGACAACAACATTGATTTTTACAAATACTACCGTAGCAATAACTCTTTCCTCGATGAGAATTTTTTTATTAGGGGTAAACACGATATTAGGTTATGGCTGGACACCTTTTATTTTGAGGCAGACCATCGTTTTTGTACTTCCCACGACTATAAAGTCGCCAAAATAATTGCCAACGACCTGATACAAGTATATATCGAAGACAAGCTAAATAGTAACTATCGAAAAGTATTTGATAATTCTTCTCTCAATTGGACAGCAAGCAAAACAGCAATGACTGAACTGATTTATGGACTTCATTCTAAGGGAGTATTTGACAACGGAAATGCCGATATAAAACTTATTGCCAAAACCTTTGAAAGTGCCTTTAATATTGATTTGGGCGATTTCTACCATACGTTTATGGAATTGAAAGCCCGTAAAATAAACCGAACAAAATTCCTCGACAGCCTGTGCGAAGCCCTGATAAAGAAAATGGACGAGCAGGACGAAAAGTAA
PROTEIN sequence
Length: 274
MKKIHNEILNKLITTIDELEFESDFSIQKTETIIKLIIQSLSDLKEYVLKNGFKNTDEEIQFFKYLKPAIVSKLIYYNAVYKIETKKPYGEKQTKNFLTKELNKLKKFFDNNIDFYKYYRSNNSFLDENFFIRGKHDIRLWLDTFYFEADHRFCTSHDYKVAKIIANDLIQVYIEDKLNSNYRKVFDNSSLNWTASKTAMTELIYGLHSKGVFDNGNADIKLIAKTFESAFNIDLGDFYHTFMELKARKINRTKFLDSLCEALIKKMDEQDEK*