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scnpilot_p_inoc_scaffold_114_curated

Search features with annotation key words

Displaying items 121-150 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_114_curated_121
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(137232..137723)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G4L3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI89826.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
protein of unknown function (DUF1573)
scnpilot_p_inoc_scaffold_114_curated_122
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(137764..139059)
DNA (1296bp) protein (432aa)
hypothetical protein; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UN09_TANFA
Uncharacterized protein {ECO:0000313|EMBL:BAR48273.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
scnpilot_p_inoc_scaffold_114_curated_123
unknown

Not on your lists

comp(139076..139414)
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_curated_124
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(139418..140419)
DNA (1002bp) protein (334aa)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G4Y1_ECHVK
mannose-1-phosphate guanylyltransferase
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:AGA80592.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_p_inoc_scaffold_114_curated_125
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(140434..140988)
DNA (555bp) protein (185aa)
dTDP-4-dehydrorhamnose 3,5-epimerase 3 {ECO:0000313|EMBL:CDF81228.1}; EC=5.1.3.1 {ECO:0000313|EMBL:CDF81228.1};; EC=5.1.3.13 {ECO:0000313|EMBL:CDF81228.1};; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa agariphila KMM 3901.;"
dTDP-L-rhamnose synthetase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase 3 n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KRT5_9FLAO
scnpilot_p_inoc_scaffold_114_curated_126
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(140990..142051)
DNA (1062bp) protein (354aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CD10_SPHS2
scnpilot_p_inoc_scaffold_114_curated_127
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

142255..145689
DNA (3435bp) protein (1145aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE87_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO44560.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_128
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(145704..146639)
DNA (936bp) protein (312aa)
ribosome biogenesis GTPase RsgA; K06949 ribosome biogenesis GTPase [EC:3.6.1.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EFC34
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_114_curated_129
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(146642..147397)
DNA (756bp) protein (252aa)
Protein involved in gliding motility GldF n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJW8_NIAKG
gliding motility protein GldF
Protein involved in gliding motility GldF {ECO:0000313|EMBL:AEW01866.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_114_curated_130
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

147933..148778
DNA (846bp) protein (282aa)
RteC protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXH4_9SPHI
RteC protein {ECO:0000313|EMBL:EFK57593.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
RteC protein
scnpilot_p_inoc_scaffold_114_curated_131
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

149051..149404
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2U2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK34653.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_132
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

149429..149722
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZV4_9FLAO
Excisionase {ECO:0000313|EMBL:KFF19998.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_133
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

149820..151271
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0J8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO11347.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_134
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

151274..153358
DNA (2085bp) protein (695aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase n=1 Tax=Empedobacter brevis RepID=UPI00037733F4
DNA topoisomerase III {ECO:0000313|EMBL:GAE65851.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
scnpilot_p_inoc_scaffold_114_curated_135
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

153355..154233
DNA (879bp) protein (293aa)
Putative toxin-antitoxin system, toxin component, Fic family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT65_9SPHI
Fic family toxin-antitoxin system {ECO:0000313|EMBL:CDT30991.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
KilA-N, DNA-binding domain-containing protein
scnpilot_p_inoc_scaffold_114_curated_136
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(154285..155043)
DNA (759bp) protein (253aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF76090.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein LGrbi_08461 id=2145293 bin=GWE2_Bacteroidetes_42_42 species=Lentibacillus jeotgali genus=Lentibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_137
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(155062..157191)
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I642_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AIL44279.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_138
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

157375..157812
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2U7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64115.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_139
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

157799..163249
DNA (5451bp) protein (1817aa)
Helicase C-terminal domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRT9_9SPHI
DNA methylase {ECO:0000313|EMBL:KFF20010.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
N-6 DNA methylase
scnpilot_p_inoc_scaffold_114_curated_140
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(163258..164079)
DNA (822bp) protein (274aa)
RteC protein n=2 Tax=Bacteroidetes RepID=D7VT63_9SPHI
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KEQ31130.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
Tetracycline regulation of excision, RteC
scnpilot_p_inoc_scaffold_114_curated_141
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(164326..166824)
DNA (2499bp) protein (833aa)
ATPase P (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8]
ATPase P n=1 Tax=Galbibacter marinus RepID=K2PNC4_9FLAO
ATPase P {ECO:0000313|EMBL:EKF54050.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
scnpilot_p_inoc_scaffold_114_curated_142
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(166923..167489)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000373E7C6
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:ABQ07471.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_114_curated_143
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(167494..168243)
DNA (750bp) protein (250aa)
PA-phosphatase n=1 Tax=Empedobacter brevis RepID=UPI0003708495
PA-phosphatase-like phosphoesterase
Phosphoesterase, PA-phosphatase related {ECO:0000313|EMBL:ABQ07470.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_114_curated_144
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(168245..169372)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J1R9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ58914.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_114_curated_145
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(169382..173701)
DNA (4320bp) protein (1440aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HUF5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ58915.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
CzcA family heavy metal efflux protein
scnpilot_p_inoc_scaffold_114_curated_146
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(173890..174219)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003800E07
Uncharacterized protein {ECO:0000313|EMBL:CDS97992.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_147
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(174391..176391)
DNA (2001bp) protein (667aa)
TraG family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZX3_9FLAO
TraG family protein {ECO:0000313|EMBL:EFK33903.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_148
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(176494..177783)
DNA (1290bp) protein (430aa)
relaxase n=1 Tax=Empedobacter brevis RepID=UPI0003605E58
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EEI94336.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
Relaxase/mobilization nuclease family protein
scnpilot_p_inoc_scaffold_114_curated_149
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(177780..178223)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037E644A
Uncharacterized protein {ECO:0000313|EMBL:EEI94337.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_150
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

178937..179704
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2W7_9FLAO
Conjugal transfer protein TraA {ECO:0000313|EMBL:KGO11320.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
chromosome partitioning ATPase
Displaying items 121-150 of 199 in total

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