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scnpilot_p_inoc_scaffold_114_curated

Search features with annotation key words

Displaying items 31-60 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_114_curated_31
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

34315..35085
DNA (771bp) protein (257aa)
phosphosulfolactate synthase; K08097 phosphosulfolactate synthase [EC:4.4.1.19]
phosphosulfolactate synthase n=1 Tax=Segetibacter koreensis RepID=UPI00037780A3
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_114_curated_32
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35376..35834
DNA (459bp) protein (153aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
dtd; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-); K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Joostella marina DSM 19592 RepID=I3C5V8_9FLAO
scnpilot_p_inoc_scaffold_114_curated_33
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35873..36424)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQD6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17741.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_34
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36433..37713)
DNA (1281bp) protein (427aa)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI63_CHIPD
prolipoprotein diacylglyceryl transferase
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:ACU63625.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_114_curated_35
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37735..38226)
DNA (492bp) protein (164aa)
UPF0234 protein Cpin_6212 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI56_CHIPD
hypothetical protein; K09767 hypothetical protein
UPF0234 protein Cpin_6212 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_114_curated_36
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38339..40042
DNA (1704bp) protein (568aa)
Peptidase M23 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNY0_CHIPD
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACU58677.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_114_curated_37
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40039..40395)
DNA (357bp) protein (119aa)
UPF0102 protein Sph21_0669 id=4507389 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein; K07460 putative endonuclease
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_p_inoc_scaffold_114_curated_38
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

40426..41412
DNA (987bp) protein (329aa)
manA; bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Saprospira grandis DSM 2844 RepID=J0NX35_9SPHI
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_114_curated_39
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41460..42659
DNA (1200bp) protein (400aa)
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1]
Alanine dehydrogenase {ECO:0000313|EMBL:ACU58757.1}; EC=1.4.1.1 {ECO:0000313|EMBL:ACU58757.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Alanine dehydrogenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ68_CHIPD
scnpilot_p_inoc_scaffold_114_curated_40
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

42780..44018
DNA (1239bp) protein (413aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9T7_NIAKG
scnpilot_p_inoc_scaffold_114_curated_41
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

44254..45735
DNA (1482bp) protein (494aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
malate:quinone oxidoreductase; K00116 malate dehydrogenase (quinone) [EC:1.1.5.4]
Probable malate:quinone oxidoreductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NKF4_9SPHI
scnpilot_p_inoc_scaffold_114_curated_42
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46139..47770)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R0H3_RIEAN
Uncharacterized protein {ECO:0000313|EMBL:KGD66779.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_43
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


47957..49750
DNA (1794bp) protein (598aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJI0_9SPHI
scnpilot_p_inoc_scaffold_114_curated_44
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

49933..51132
DNA (1200bp) protein (400aa)
Exonuclease SbcCD, D subunit n=2 Tax=Myroides odoratimimus RepID=H1GQK6_9FLAO
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EHO06021.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
nuclease SbcCD subunit D; K03547 exonuclease SbcD
scnpilot_p_inoc_scaffold_114_curated_45
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

51146..54175
DNA (3030bp) protein (1010aa)
Exonuclease SbcC n=1 Tax=Myroides odoratimimus CCUG 10230 RepID=H1GQK5_9FLAO
Exonuclease SbcC {ECO:0000313|EMBL:AJH16042.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
SMC domain-containing protein; K03546 exonuclease SbcC
scnpilot_p_inoc_scaffold_114_curated_46
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

54207..55040
DNA (834bp) protein (278aa)
Putative holliday junction resolvase Hjc n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VR85_9SPHI
Putative holliday junction resolvase Hjc {ECO:0000313|EMBL:EFK56286.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
nuclease
scnpilot_p_inoc_scaffold_114_curated_47
unknown

Not on your lists

comp(55302..55418)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_curated_48
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

55709..58357
DNA (2649bp) protein (883aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GHY1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:BAP33469.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_49
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58371..59468
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000371E31D
Uncharacterized protein {ECO:0000313|EMBL:KHJ38828.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_50
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(59539..64092)
DNA (4554bp) protein (1518aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZI5_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91797.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_114_curated_51
unknown

Not on your lists

comp(64050..64433)
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_curated_52
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(64832..69229)
DNA (4398bp) protein (1466aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W068_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91802.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_114_curated_53
unknown

Not on your lists

69353..69457
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_curated_54
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69735..71390)
DNA (1656bp) protein (552aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KE53_9FLAO
AraC-type helix-turn-helix domain-containing protein {ECO:0000313|EMBL:CDN73881.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
AraC-type helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_114_curated_55
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(72224..72988)
DNA (765bp) protein (255aa)
Tax=CG_Bacteroid_02
scnpilot_p_inoc_scaffold_114_curated_56
unknown

Not on your lists

73056..73535
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_curated_57
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(73888..74331)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9DTY7_9BACE
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_p_inoc_scaffold_114_curated_58
unknown

Not on your lists

comp(74475..74618)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_curated_59
unknown

Not on your lists

74662..74868
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_curated_60
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(75316..76053)
DNA (738bp) protein (246aa)
shikimate dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6YBM3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD33348.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
Displaying items 31-60 of 199 in total

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