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scnpilot_p_inoc_scaffold_114_curated

Search features with annotation key words

Displaying items 181-199 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_114_curated_181
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(207135..207752)
DNA (618bp) protein (206aa)
PRTRC system protein E n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0F6_9FLAO
PRTRC system protein E {ECO:0000313|EMBL:EFK33955.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
prtrc system protein e
scnpilot_p_inoc_scaffold_114_curated_182
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(207771..208115)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2Z9_9FLAO
Molybdenum ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFF76126.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_183
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(208133..208339)
DNA (207bp) protein (69aa)
nucleotide binding protein n=1 Tax=Empedobacter brevis RepID=UPI0003744396
DNA-binding protein {ECO:0000313|EMBL:KGO11294.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_184
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(208393..208803)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W090_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDT25484.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_185
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(208856..209929)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036E24D1
Alpha/beta hydrolase {ECO:0000313|EMBL:KGO08739.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
phage/plasmid-like protein
scnpilot_p_inoc_scaffold_114_curated_186
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(209973..210365)
DNA (393bp) protein (131aa)
Single-stranded DNA-binding protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W304_9FLAO
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
single stranded DNA-binding protein
scnpilot_p_inoc_scaffold_114_curated_187
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(211025..212350)
DNA (1326bp) protein (442aa)
integrase n=1 Tax=Empedobacter brevis RepID=UPI00036A9533
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFK56917.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
integrase family protein
scnpilot_p_inoc_scaffold_114_curated_188
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

212632..214611
DNA (1980bp) protein (660aa)
dehydrogenase E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
Dehydrogenase E1 component n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJW5_CHIPD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_114_curated_189
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

214894..215340
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C840_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL66179.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
scnpilot_p_inoc_scaffold_114_curated_190
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

215939..217048
DNA (1110bp) protein (370aa)
DNA protecting protein DprA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLJ6_NIAKG
DNA protecting protein DprA; K04096 DNA processing protein
DNA protecting protein DprA {ECO:0000313|EMBL:AEV96565.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_114_curated_191
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(217045..217644)
DNA (600bp) protein (200aa)
RNA polymerase sigma factor/ECF subfamily (Sigma-70) n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIR2_9SPHI
RNA polymerase sigma factor/ECF subfamily (Sigma-70) {ECO:0000313|EMBL:EDM34607.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_114_curated_192
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(217838..219010)
DNA (1173bp) protein (391aa)
endonuclease n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029AACFD
Uncharacterized protein {ECO:0000313|EMBL:GAF01584.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
endonuclease/exonuclease/phosphatase
scnpilot_p_inoc_scaffold_114_curated_193
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(219036..219908)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377492C
Uncharacterized protein {ECO:0000313|EMBL:KIC95239.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
rhomboid family protein
scnpilot_p_inoc_scaffold_114_curated_194
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(219912..221117)
DNA (1206bp) protein (402aa)
Aminotransferase class-III n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFU0_CHIPD
class III aminotransferase
Aminotransferase class-III {ECO:0000313|EMBL:ACU57923.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_114_curated_195
unknown

Not on your lists

221304..222347
DNA (1044bp) protein (348aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_curated_196
unknown

Not on your lists

222424..222855
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_curated_197
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(223416..225380)
DNA (1965bp) protein (655aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I758_9PORP
scnpilot_p_inoc_scaffold_114_curated_198
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

225722..226855
DNA (1134bp) protein (378aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27); K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:ADX66931.1}; EC=1.13.11.27 {ECO:0000313|EMBL:ADX66931.1};; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC; 16016 / NCTC 11634 / CL345/78).;"
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0NXM4_WEEVC
scnpilot_p_inoc_scaffold_114_curated_199
unknown

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227151..227231
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying items 181-199 of 199 in total

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