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scnpilot_p_inoc_scaffold_2041_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2041_curated_1
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..339)
DNA (339bp) protein (113aa)
sodium:proton antiporter n=1 Tax=Cupriavidus sp. WS RepID=UPI00036DD68C
Sodium:proton antiporter {ECO:0000313|EMBL:KJK21236.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
CPA1 family Na(+)/H(+) antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family
scnpilot_p_inoc_scaffold_2041_curated_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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551..1090
DNA (540bp) protein (180aa)
RNA polymerase sigma factor, FecI family n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DXX5_PSEMN
FecI family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor, FecI family {ECO:0000313|EMBL:AEB56327.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
scnpilot_p_inoc_scaffold_2041_curated_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1090..1971
DNA (882bp) protein (294aa)
Anti-sigma factor protein, FecR family n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DXX6_PSEMN
FecR family anti-sigma factor protein
Anti-sigma factor protein, FecR family {ECO:0000313|EMBL:AEB56328.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
scnpilot_p_inoc_scaffold_2041_curated_4
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2063..4633
DNA (2571bp) protein (857aa)
TonB-dependent siderophore receptor n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YFW1_9RHOO
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ENO90375.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
Fe(3+)-pyochelin receptor; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_2041_curated_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4643..5548)
DNA (906bp) protein (302aa)
folate-binding protein n=1 Tax=Acidovorax avenae RepID=UPI0002E39FA6
Glycine cleavage T protein (Aminomethyl transferase) {ECO:0000313|EMBL:EHL20846.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
glycine cleavage T protein (aminomethyl transferase); K06980
scnpilot_p_inoc_scaffold_2041_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5597..6586
DNA (990bp) protein (330aa)
Aminodeoxychorismate lyase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY39_9BURK
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AFU45837.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_2041_curated_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6752..7408
DNA (657bp) protein (219aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Thymidylate kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUW9_ALIDB
scnpilot_p_inoc_scaffold_2041_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7405..8400
DNA (996bp) protein (332aa)
DNA-directed DNA polymerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3S6_9BURK
DNA-directed DNA polymerase
DNA-directed DNA polymerase {ECO:0000313|EMBL:AFU45839.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_2041_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8419..8778
DNA (360bp) protein (120aa)
Type IV pilus assembly pilz n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Q5_9BURK
type IV pilus assembly pilz
Type IV pilus assembly pilz {ECO:0000313|EMBL:AFU45840.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_2041_curated_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8817..9641
DNA (825bp) protein (275aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-]
Hydrolase, TatD family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4N8_ACIDE
Hydrolase, TatD family {ECO:0000313|EMBL:EER60573.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_p_inoc_scaffold_2041_curated_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9638..10309
DNA (672bp) protein (224aa)
ankyrin id=12550545 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ankyrin
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_2041_curated_12
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10372..12159)
DNA (1788bp) protein (596aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4N6_ACIDE
lipid A export ATP-binding/permease protein msbA-like
scnpilot_p_inoc_scaffold_2041_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12281..13597
DNA (1317bp) protein (439aa)
Protein TolB n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3T0_9BURK
tolB; translocation protein TolB
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_2041_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13645..14181
DNA (537bp) protein (179aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Q9_9BURK
peptidoglycan-associated lipoprotein
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:AFU45845.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_2041_curated_15
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14181..14768
DNA (588bp) protein (196aa)
Tol-pal system protein YbgF n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q770_ACIAP
tol-pal system protein YbgF
Tol-pal system protein YbgF {ECO:0000313|EMBL:ADX45745.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Displaying 15 items

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