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scnpilot_p_inoc_scaffold_4054_curated_2

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(1097..1753)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 217.0
  • Bit_score: 423
  • Evalue 1.90e-115
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 216.0
  • Bit_score: 418
  • Evalue 1.80e-114
3-isopropylmalate dehydratase small subunit n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003767941 similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 217.0
  • Bit_score: 423
  • Evalue 1.30e-115

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGCAGAAATTCACCGTGCACAAGGGCCTGGTGGCCCCCATGGACCGCGAGAACGTCGATACCGACGCCATCATCCCCAAGCAGTTCCTCAAGTCGATCAAGAAGACCGGCTTCGGCCCCAACCTGTTCGACGAATGGCGCTACCTGGACCAGCCGGGCCAGCCGGGCGTGCCCGAGAGCGCGCGCAAGCCCAACCCCGGCTTCGTGCTGAACCAGCCGCGCTACCAGGGCGCGAGCGTGCTGGTGGCGCGCAAGAACTTCGGCTGCGGCTCCAGCCGCGAGCACGCGCCCTGGGCGCTGGAGCAGTACGGCTTCCGCGCCATCATCGCGCCGAGCTTCGCCGACATCTTCTTCAACAACTGCTTCAAGAACGGGCTGCTGCCCATCGTGCTGCCCGAGGCCACGGTGGACCAGCTTTTCAACGAGGTGGCGGCCTTCCCCGGCTACGAACTCACCGTCGACCTGGAACGCCAGGTGATCGTGCGCCCGCAGGGCGAGGAAATCCCGTTCGACGTGATCCCGTTCCGCAAGTACTGCCTGCTGAACGGTTTCGACGACATCGGCCTGACGCTGCGCCACAAGGACAAGATCGCCGCCTTCGAGGCGCACCGCCTGGCCACCAAGCCCTGGCTGGCGCACACCATGGCACAGGGCTGA
PROTEIN sequence
Length: 219
MQKFTVHKGLVAPMDRENVDTDAIIPKQFLKSIKKTGFGPNLFDEWRYLDQPGQPGVPESARKPNPGFVLNQPRYQGASVLVARKNFGCGSSREHAPWALEQYGFRAIIAPSFADIFFNNCFKNGLLPIVLPEATVDQLFNEVAAFPGYELTVDLERQVIVRPQGEEIPFDVIPFRKYCLLNGFDDIGLTLRHKDKIAAFEAHRLATKPWLAHTMAQG*