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scnpilot_p_inoc_scaffold_4054_curated_3

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(1765..3186)

Top 3 Functional Annotations

Value Algorithm Source
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 473.0
  • Bit_score: 892
  • Evalue 6.90e-257
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 473.0
  • Bit_score: 892
  • Evalue 3.10e-256
3-isopropylmalate dehydratase large subunit n=3 Tax=Acidovorax RepID=LEUC_ACIAC similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 473.0
  • Bit_score: 892
  • Evalue 2.20e-256
  • rbh

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGGGACGCACCCTGTACGACAAGATCTTCGACGAGCACGTCGTCCACACCGAGGAGGACGGCACCGCCGTGCTCTACATCGACCGCCACCTGGTGCACGAGGTGACCAGCCCGCAGGCCTTCGAGGGCCTGCGCGAGGCGGGCCGCAAGGTGTGGCGCGTCAGCTCCATCGTGGCCACGGCCGACCACAACACGCCCACCACGGGCTGGGAGCTGGGCTACGACGGCATCGCCGACCCGATCAGCAAGGAGCAGATCACCACGCTGGACAAGAACATCGCCGAAGTGGGCGCGGCCGCCTTCTTCCCGTTCATGAGCAAGCGCCAGGGCATCGTGCACGTCATCGGCCCGGAAAACGGCGCCACGCTGCCCGGCATGACCGTGGTCTGCGGCGACTCGCACACCTCCACGCACGGCGCCTTCGGCGCGCTGGCGCACGGCATCGGCACCAGCGAGGTCGAGCACGTGATGGCCACGCAGACGCTGCTGGCCAAGAAGGCCAGGAACATGCGCATCCAGGTCGATGGCAAGGTGGCGCCCGGCATCACGGCCAAGGACATCGTGCTGGCCATCATCGGCAAGATCGGCACGGCCGGCGGCACGGGCTACACCATCGAGTTCGCGGGCGACGCCATCCGCGCGCTGTCGGTGGAAGGCCGCATGACGGTGTGCAACATGGCCATCGAAGCCGGCGCGCGCGCCGGCCTGGTGGCCGTGGACGAAAAGACCATCGAGTACGTCAAGGGTCGCCCGCTGGCGCCCACCGGCGTGGAGTGGGAGCAGGCCGTGGCGTACTGGAAGACGCTGCACTCCGACGCCGACGCGCACTTCGACGCCGTGGTCACGCTGCGCGCCGAGGACATCGTGCCCCAGGTCACCTGGGGCACCAGCCCCGAGATGGTGGTGGGCGTGGACACCACCGTGCCCGACCCCGACAAGGAAAAGGACGCCAACAAGCGCGGCGCCATGGAGCGCGCGCTGACCTACATGGCGCTGGAGCCGGGCAAGCCGCTGAACGACATCTTCGTGGACAAGGTGTTCATCGGCTCGTGCACCAACAGCCGCATCGAGGACATGCGCGAGGCCGCCGCCGTGGTCAAGAAGCTGGGCCAGAAGGTGGCCAGGAACATCAAGCAGGCGCTGGTGGTGCCCGGCTCGGGCCTGGTGAAGGACCAGGCCGAACGCGAAGGGCTGGACCAGATCTTCAAGGCCGCGGGCTTCGAGTGGCGCGAGCCCGGCTGCTCCATGTGCCTCGCCATGAACGCCGACCGCCTGGAGCCCGGCGAGCGCTGCGCCTCCACCAGCAACCGCAACTTCGAGGGCCGCCAGGGCGCGGGCGGGCGCACGCACCTGGTCAGCCCGGCCATGGCCGCGGCGGCGGCCATCCACGGCCACTTCGTGGACATCCGCAAATTCGCCTGA
PROTEIN sequence
Length: 474
MGRTLYDKIFDEHVVHTEEDGTAVLYIDRHLVHEVTSPQAFEGLREAGRKVWRVSSIVATADHNTPTTGWELGYDGIADPISKEQITTLDKNIAEVGAAAFFPFMSKRQGIVHVIGPENGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVMATQTLLAKKARNMRIQVDGKVAPGITAKDIVLAIIGKIGTAGGTGYTIEFAGDAIRALSVEGRMTVCNMAIEAGARAGLVAVDEKTIEYVKGRPLAPTGVEWEQAVAYWKTLHSDADAHFDAVVTLRAEDIVPQVTWGTSPEMVVGVDTTVPDPDKEKDANKRGAMERALTYMALEPGKPLNDIFVDKVFIGSCTNSRIEDMREAAAVVKKLGQKVARNIKQALVVPGSGLVKDQAEREGLDQIFKAAGFEWREPGCSMCLAMNADRLEPGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAAIHGHFVDIRKFA*