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scnpilot_p_inoc_scaffold_354_curated

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Displaying items 31-60 of 179 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_354_curated_31
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31780..32595
DNA (816bp) protein (272aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0G8_ACIDE
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EER61986.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
CRP/FNR family transcriptional regulator
scnpilot_p_inoc_scaffold_354_curated_32
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32791..33105
DNA (315bp) protein (105aa)
swib/mdm2 domain-containing protein id=12553286 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
SWIB/MDM2 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_33
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33454..35628
DNA (2175bp) protein (725aa)
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein id=12553285 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_34
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35690..36373
DNA (684bp) protein (228aa)
putative hydroxylase; K07336 PKHD-type hydroxylase [EC:1.14.11.-] id=12553284 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
putative hydroxylase; K07336 PKHD-type hydroxylase [EC:1.14.11.-]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_35
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36647..37345
DNA (699bp) protein (233aa)
TonB family protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EHK9_9BURK
TonB family protein; K03832 periplasmic protein TonB
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_36
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37365..38084
DNA (720bp) protein (240aa)
MotA/TolQ/ExbB proton channel id=12552987 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
mota/tolq/exbb proton channel; K03561 biopolymer transport protein ExbB
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_37
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38087..38497
DNA (411bp) protein (137aa)
biopolymer transport protein ExbD/TolR id=12552986 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_38
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38632..38820
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8J5_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42570.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_354_curated_39
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39009..41357)
DNA (2349bp) protein (783aa)
Ribonuclease R n=1 Tax=Acidovorax sp. KKS102 RepID=K0I940_9BURK
ribonuclease R
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_40
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41770..44430)
DNA (2661bp) protein (887aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HRE3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45513.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_354_curated_41
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44524..47751)
DNA (3228bp) protein (1076aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TY88_ALIDB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_42
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48551..49429
DNA (879bp) protein (293aa)
lytic transglycosylase catalytic subunit id=12551666 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
lytic transglycosylase catalytic subunit
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_43
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49664..50908
DNA (1245bp) protein (415aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
serine hydroxymethyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002375481
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_354_curated_44
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50934..51383
DNA (450bp) protein (150aa)
nrdR; nrdr family transcriptional regulator; K07738 transcriptional repressor NrdR id=12551664 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_45
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51441..52415
DNA (975bp) protein (325aa)
hypothetical protein id=12551663 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_46
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52416..53513)
DNA (1098bp) protein (366aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] id=12551662 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_47
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53686..54135)
DNA (450bp) protein (150aa)
CBS domain containing protein n=2 Tax=Acidovorax RepID=B9MAD1_ACIET
cbs domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_48
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54243..55544
DNA (1302bp) protein (434aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49) id=12551660 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_49
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55541..56362
DNA (822bp) protein (274aa)
alpha/beta fold family hydrolase id=12551659 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
alpha/beta fold family hydrolase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_50
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56391..57668)
DNA (1278bp) protein (426aa)
ribonuclease BN id=12552761 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ribonuclease BN
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_51
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57692..58105
DNA (414bp) protein (138aa)
membrane protein id=12552762 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
membrane protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_52
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58146..59561
DNA (1416bp) protein (472aa)
D-lactate dehydrogenase (EC:1.1.2.4) id=12552763 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
D-lactate dehydrogenase (EC:1.1.2.4)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_53
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59721..60554
DNA (834bp) protein (278aa)
thyA; thymidylate synthase (EC:2.1.1.45) id=12552764 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_54
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60557..60859
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZUT4_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO98257.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
scnpilot_p_inoc_scaffold_354_curated_55
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60882..61373
DNA (492bp) protein (164aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5W4_ACIDE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_56
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61396..62208)
DNA (813bp) protein (271aa)
Transcriptional regulator, ModE family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5W3_ACIDE
ModE family transcriptional regulator; K02019 molybdate transport system regulatory protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_57
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62201..62746)
DNA (546bp) protein (182aa)
UPI0003D40379 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D40379
Uncharacterized protein {ECO:0000313|EMBL:GAD23968.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_354_curated_58
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62737..63423)
DNA (687bp) protein (229aa)
modC; molybdate ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29] id=12552767 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
modC; molybdate ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_59
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63601..64272)
DNA (672bp) protein (224aa)
modB; molybdate ABC transporter inner membrane subunit; K02018 molybdate transport system permease protein id=12552768 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
modB; molybdate ABC transporter inner membrane subunit; K02018 molybdate transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_60
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64275..65033)
DNA (759bp) protein (253aa)
modA; molybdate ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein id=12552769 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
modA; molybdate ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying items 31-60 of 179 in total

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