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scnpilot_p_inoc_scaffold_354_curated

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Displaying items 151-179 of 179 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_354_curated_151
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160584..160868)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0000265747
Uncharacterized protein {ECO:0000313|EMBL:GAO20823.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_354_curated_152
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160865..161185)
DNA (321bp) protein (107aa)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit {ECO:0000313|EMBL:GAO20822.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_354_curated_153
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161539..162429)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000314CB1D
Transcriptional regulator {ECO:0000313|EMBL:GAO20821.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
nahR; putative LysR-type transcriptional regulator NahR
scnpilot_p_inoc_scaffold_354_curated_154
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162522..164138
DNA (1617bp) protein (539aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00031866EF
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:GAO20820.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_354_curated_155
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164178..165173
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FE8421
Uncharacterized protein {ECO:0000313|EMBL:GAO20819.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
extra-cytoplasmic solute receptor
scnpilot_p_inoc_scaffold_354_curated_156
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165340..166476
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E7EF12
Porin Gram-negative type {ECO:0000313|EMBL:GAO20818.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
outer membrane porin protein
scnpilot_p_inoc_scaffold_354_curated_157
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166572..167858
DNA (1287bp) protein (429aa)
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334};; Homogentisate oxygenase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisic acid oxidase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisicase {ECO:0000256|HAMAP-Rule:MF_00334}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1
homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5]
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00036D31EC
scnpilot_p_inoc_scaffold_354_curated_158
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167855..169177
DNA (1323bp) protein (441aa)
fumarylacetoacetase (EC:3.7.1.2); K01555 fumarylacetoacetase [EC:3.7.1.2]
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000308B6D0
Fumarylacetoacetase {ECO:0000313|EMBL:GAO20816.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_354_curated_159
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169233..169529)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00037CC356
Uncharacterized protein {ECO:0000313|EMBL:GAO20815.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_354_curated_160
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169935..171101)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003798359
Extracellular ligand-binding receptor {ECO:0000313|EMBL:GAO20814.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
extracellular ligand-binding receptor
scnpilot_p_inoc_scaffold_354_curated_161
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171490..171654)
DNA (165bp) protein (55aa)
Para-aminobenzoate synthase, component I {ECO:0000313|EMBL:GAO20792.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_354_curated_162
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171817..173100)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00030E31FB
Citrate synthase {ECO:0000313|EMBL:GAO20791.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
citrate synthase
scnpilot_p_inoc_scaffold_354_curated_163
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173477..173980)
DNA (504bp) protein (168aa)
MarR family transcriptional regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI00030350A7
MarR family transcriptional regulator {ECO:0000313|EMBL:GAO20790.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
regulatory protein MarR
scnpilot_p_inoc_scaffold_354_curated_164
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174656..175825)
DNA (1170bp) protein (390aa)
FMN-dependent alpha-hydroxy acid dehydrogenase; K15054 (S)-mandelate dehydrogenase [EC:1.1.99.31]
hypothetical protein, partial n=1 Tax=Chryseobacterium taeanense RepID=UPI0003626012
L-lactate dehydrogenase {ECO:0000313|EMBL:GAO20789.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_354_curated_165
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175835..176809)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00037A0469
Extra-cytoplasmic solute receptor protein {ECO:0000313|EMBL:GAO20788.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
bug; ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_354_curated_166
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176989..177909)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003796841
Uncharacterized protein {ECO:0000313|EMBL:AIJ48456.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_354_curated_167
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178095..179213)
DNA (1119bp) protein (373aa)
4,5-dihydroxyphthalate dehydrogenase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FB9B6E
4,5-dihydroxyphthalate dehydrogenase {ECO:0000313|EMBL:AIJ48457.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
oxidoreductase domain-containing protein
scnpilot_p_inoc_scaffold_354_curated_168
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179270..180247)
DNA (978bp) protein (326aa)
phthalate 4,5-dioxygenase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F0FC30
Phthalate 4,5-dioxygenase {ECO:0000313|EMBL:AIJ48458.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
ferredoxin
scnpilot_p_inoc_scaffold_354_curated_169
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180257..181234)
DNA (978bp) protein (326aa)
4,5-dihydroxyphthalate dehydrogenase n=1 Tax=Chryseobacterium taeanense RepID=UPI00031F83E7
Uncharacterized protein {ECO:0000313|EMBL:EED67078.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_354_curated_170
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181267..182229)
DNA (963bp) protein (321aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55); K04102 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55]
4,5-dihydroxyphthalate decarboxylase n=1 Tax=Chryseobacterium taeanense RepID=UPI0003730372
4,5-dihydroxyphthalate decarboxylase {ECO:0000313|EMBL:AIJ48460.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
scnpilot_p_inoc_scaffold_354_curated_171
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182261..183580)
DNA (1320bp) protein (440aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQT1_COMTE
MarR family transcriptional regulator {ECO:0000313|EMBL:AIJ48461.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_354_curated_172
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183625..184086)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003635C67
Hemerythrin {ECO:0000313|EMBL:AIJ48462.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
hypothetical protein
scnpilot_p_inoc_scaffold_354_curated_173
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184449..185306
DNA (858bp) protein (286aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003750188
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
scnpilot_p_inoc_scaffold_354_curated_174
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185407..186462)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E4E830
Alcohol dehydrogenase Zn-binding {ECO:0000313|EMBL:GAN77781.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
alcohol dehydrogenase
scnpilot_p_inoc_scaffold_354_curated_175
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186510..188024)
DNA (1515bp) protein (505aa)
aldehyde dehydrogenase; K00155 [EC:1.2.1.-]
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00035FA0A3
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
scnpilot_p_inoc_scaffold_354_curated_176
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188129..189313)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F0B05E
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDR88101.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
ABC transporter binding protein
scnpilot_p_inoc_scaffold_354_curated_177
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189383..190087)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F8422A
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABL68295.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
scnpilot_p_inoc_scaffold_354_curated_178
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190084..190842)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000307FA49
ABC transporter
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ABL68294.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
scnpilot_p_inoc_scaffold_354_curated_179
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190839..191408)
DNA (570bp) protein (190aa)
hypothetical protein, partial n=1 Tax=Chryseobacterium taeanense RepID=UPI00035F247C
Uncharacterized protein {ECO:0000313|EMBL:KDR88099.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Displaying items 151-179 of 179 in total

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