ggKbase home page

scnpilot_p_inoc_scaffold_354_curated

Search features with annotation key words

Displaying items 1-30 of 179 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_354_curated_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(288..2009)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003790E1D
Uncharacterized protein {ECO:0000313|EMBL:GAD23527.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
sensory box histidine kinase/response regulator
scnpilot_p_inoc_scaffold_354_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1996..2637)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E21FF
Response regulator {ECO:0000313|EMBL:GAD23526.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
LuxR family two-component response regulator
scnpilot_p_inoc_scaffold_354_curated_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2778..3278
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037FA019
Uncharacterized protein {ECO:0000313|EMBL:GAD23525.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_354_curated_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3307..3846
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003803B76
Uncharacterized protein {ECO:0000313|EMBL:GAD23524.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_354_curated_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3843..4688
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F50B3
Uncharacterized protein {ECO:0000313|EMBL:GAD23523.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_354_curated_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4717..5436
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036DB788
Uncharacterized protein {ECO:0000313|EMBL:GAD23522.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_354_curated_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5478..6500
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365BAC0
Uncharacterized protein {ECO:0000313|EMBL:GAD23521.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ywmD; von Willebrand factor type A
scnpilot_p_inoc_scaffold_354_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6665..7648
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365BAC0
Uncharacterized protein {ECO:0000313|EMBL:GAD23521.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
von Willebrand factor, type A; K07114 uncharacterized protein
scnpilot_p_inoc_scaffold_354_curated_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8093..9424
DNA (1332bp) protein (444aa)
UPI0003D3E128 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3E128
Uncharacterized protein {ECO:0000313|EMBL:GAD23520.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_354_curated_10
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9449..10063)
DNA (615bp) protein (205aa)
chromate transporter n=1 Tax=Acidovorax radicis RepID=UPI00023777C4
chromate transporter
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_354_curated_11
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10368..11294)
DNA (927bp) protein (309aa)
Phosphoribosylpyrophosphate synthetase {ECO:0000313|EMBL:EHL20781.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EHL20781.1};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
phosphoribosylpyrophosphate synthetase (EC:2.7.6.1)
Phosphoribosylpyrophosphate synthetase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3G0_9BURK
scnpilot_p_inoc_scaffold_354_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11297..12892)
DNA (1596bp) protein (532aa)
thymidine phosphorylase (EC:2.4.2.4)
Putative thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_00703};; TdRPase {ECO:0000256|HAMAP-Rule:MF_00703}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Putative thymidine phosphorylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA81_9BURK
scnpilot_p_inoc_scaffold_354_curated_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13073..13702
DNA (630bp) protein (210aa)
nlp/p60 protein id=12552127 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
nlp/p60 protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13735..14445
DNA (711bp) protein (237aa)
adenylate/guanylate cyclase id=12552126 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
adenylate/guanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14465..15478)
DNA (1014bp) protein (338aa)
class I/II aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
aminotransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D6987
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase {ECO:0000313|EMBL:GAD22236.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_354_curated_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15456..16451)
DNA (996bp) protein (332aa)
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
Cobalamin biosynthesis protein CobD n=2 Tax=Alicycliphilus denitrificans RepID=E8TZE7_ALIDB
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_354_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16462..17031)
DNA (570bp) protein (190aa)
cob(i)alamin adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] id=12552335 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cob(i)alamin adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17044..17838)
DNA (795bp) protein (265aa)
ABC transporter-like protein id=12552336 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17835..18932)
DNA (1098bp) protein (366aa)
Transport system permease n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2W6_9BURK
transport system permease
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18929..19849)
DNA (921bp) protein (307aa)
Cobalamin ABC transporter periplasmic protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBT2_9BURK
cobalamin ABC transporter periplasmic protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19846..20445)
DNA (600bp) protein (200aa)
cobalbumin biosynthesis protein; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
Cobalbumin biosynthesis protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0F7_ACIDE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20442..21788)
DNA (1347bp) protein (449aa)
CobB/CobQ domain-containing protein glutamine amidotransferase id=12552341 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
CobB/CobQ domain-containing protein glutamine amidotransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21797..23584)
DNA (1788bp) protein (596aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein id=12552342 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24047..24268
DNA (222bp) protein (74aa)
hypothetical protein id=12552343 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24265..24606
DNA (342bp) protein (114aa)
hypothetical protein id=12552344 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24903..25712
DNA (810bp) protein (270aa)
hypothetical protein id=12552345 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25701..28133)
DNA (2433bp) protein (811aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase id=12552346 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28130..29446)
DNA (1317bp) protein (439aa)
HD-GYP domain-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ECT7_9BURK
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29560..30273)
DNA (714bp) protein (238aa)
hypothetical protein id=12553289 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_354_curated_30
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30275..31657)
DNA (1383bp) protein (461aa)
coproporphyrinogen iii oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
coproporphyrinogen III oxidase id=12553288 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying items 1-30 of 179 in total

View Taxonomy