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scnpilot_p_inoc_scaffold_323_curated

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Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_323_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..583
DNA (582bp) protein (194aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
uroporphyrin-III C/tetrapyrrole methyltransferase id=12552460 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_2
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(599..1462)
DNA (864bp) protein (288aa)
Putative divalent heavy-metal cations transporter n=1 Tax=Acidovorax sp. CF316 RepID=J0KGP4_9BURK
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:KJA09980.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
zinc/iron permease
scnpilot_p_inoc_scaffold_323_curated_3
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1657..2556)
DNA (900bp) protein (300aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Carboxymethylenebutenolidase {ECO:0000313|EMBL:ACM34103.1}; EC=3.1.1.45 {ECO:0000313|EMBL:ACM34103.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Carboxymethylenebutenolidase n=2 Tax=Acidovorax RepID=A1WB13_ACISJ
scnpilot_p_inoc_scaffold_323_curated_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2674..5463)
DNA (2790bp) protein (930aa)
DNA polymerase I {ECO:0000313|EMBL:EER61404.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EER61404.1};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
DNA polymerase I n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T263_ACIDE
DNA polymerase I-like
scnpilot_p_inoc_scaffold_323_curated_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5566..5985
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036C1381
Uncharacterized protein {ECO:0000313|EMBL:GAD24074.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_323_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5998..7194
DNA (1197bp) protein (399aa)
UPI0003A77268 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003A77268
beta-lactamase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7306..10239)
DNA (2934bp) protein (978aa)
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4U1_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10422..10709)
DNA (288bp) protein (96aa)
histone family protein nucleoid-structuring protein H-NS; K03746 DNA-binding protein H-NS id=12551896 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
histone-like nucleoid-structuring protein H-NS; K03746 DNA-binding protein H-NS
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10828..12117)
DNA (1290bp) protein (430aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI000237664D
hypothetical protein; K03699 putative hemolysin
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12142..12984
DNA (843bp) protein (281aa)
apaH; diadenosine tetraphosphatase (EC:3.6.1.41) id=12551491 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
bis(5'-nucleosyl)-tetraphosphatase, symmetrical-like
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13070..14497)
DNA (1428bp) protein (476aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBA1_ACIDE
DEAD/DEAH box helicase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_12
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

14756..15457
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U9S4_DEIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV67813.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946; / LB-34).;"
scnpilot_p_inoc_scaffold_323_curated_13
unknown

Not on your lists

15454..15996
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_323_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16007..18157)
DNA (2151bp) protein (717aa)
Sulfate transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYC9_9BURK
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:AFU44820.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_323_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18166..19038)
DNA (873bp) protein (291aa)
hypothetical protein id=12551488 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein; K07054
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_16
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19103..19765
DNA (663bp) protein (221aa)
pyroglutamyl-peptidase I id=12551487 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
pyroglutamyl-peptidase I
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_323_curated_17
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19775..20347)
DNA (573bp) protein (191aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TB86_ACIDE
scnpilot_p_inoc_scaffold_323_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20402..21700)
DNA (1299bp) protein (433aa)
guanine deaminase id=12551887 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
guanine deaminase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21907..23301)
DNA (1395bp) protein (465aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Dihydrolipoyl dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY00_ALIDB
scnpilot_p_inoc_scaffold_323_curated_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23318..24637)
DNA (1320bp) protein (440aa)
dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC:2.3.1.168); K09699 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase {ECO:0000313|EMBL:AEB83011.1}; EC=2.3.1.168 {ECO:0000313|EMBL:AEB83011.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5B9_ALIDK
scnpilot_p_inoc_scaffold_323_curated_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24642..25646)
DNA (1005bp) protein (335aa)
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4); K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4]
Transketolase central region protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXZ8_ALIDB
3-methyl-2-oxobutanoate dehydrogenase {ECO:0000313|EMBL:GAO26319.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_323_curated_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25686..26921)
DNA (1236bp) protein (412aa)
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) {ECO:0000313|EMBL:AEB83009.1}; EC=1.2.4.4 {ECO:0000313|EMBL:AEB83009.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=2 Tax=Alicycliphilus denitrificans RepID=E8TXZ7_ALIDB
scnpilot_p_inoc_scaffold_323_curated_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27241..27690
DNA (450bp) protein (150aa)
histidine triad (HIT) protein id=12551877 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
histidine triad (HIT) protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27735..28784)
DNA (1050bp) protein (350aa)
adenosine deaminase (EC:3.5.4.4) id=12551474 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
adenosine deaminase (EC:3.5.4.4)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28862..30031)
DNA (1170bp) protein (390aa)
Putative ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Acidovorax sp. CF316 RepID=J1ES69_9BURK
basic membrane lipoprotein; K02058 simple sugar transport system substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30079..30999)
DNA (921bp) protein (307aa)
ABC transporter permease n=1 Tax=Acidovorax sp. KKS102 RepID=K0I762_9BURK
ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31001..32080)
DNA (1080bp) protein (360aa)
inner-membrane translocator id=12551873 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
inner-membrane translocator; K02057 simple sugar transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32067..33662)
DNA (1596bp) protein (532aa)
monosaccharide-transporting ATPase id=12551470 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
monosaccharide-transporting ATPase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_29
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33739..34671)
DNA (933bp) protein (311aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0KV22_9BURK
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_323_curated_30
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34814..36298
DNA (1485bp) protein (495aa)
molybdopterin dehydrogenase id=12551469 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
molybdopterin dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying items 1-30 of 92 in total

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