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scnpilot_p_inoc_scaffold_323_curated

Search features with annotation key words

Displaying items 61-90 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_323_curated_61
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72269..73468)
DNA (1200bp) protein (400aa)
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=12553137 bin=BDI species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
scnpilot_p_inoc_scaffold_323_curated_62
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73474..75216)
DNA (1743bp) protein (581aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB id=12553136 bin=BDI species=Laribacter hongkongensis genus=Laribacter taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
type II secretion system protein E; K02652 type IV pilus assembly protein PilB
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
scnpilot_p_inoc_scaffold_323_curated_63
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75213..76709)
DNA (1497bp) protein (499aa)
tetratricopeptide TPR_2 repeat protein id=12553135 bin=BDI species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_64
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76706..78544)
DNA (1839bp) protein (613aa)
General secretion pathway protein D n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9N5_9PROT
general secretion pathway protein D
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
scnpilot_p_inoc_scaffold_323_curated_65
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78541..80076)
DNA (1536bp) protein (512aa)
type II secretory pathway protein ExeA id=12553132 bin=BDI species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
type II secretory pathway protein ExeA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
scnpilot_p_inoc_scaffold_323_curated_66
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80202..81521)
DNA (1320bp) protein (440aa)
Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Fmu (Sun) domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE77_ALIDK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_67
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81719..82300)
DNA (582bp) protein (194aa)
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Phosphoribosylglycinamide formyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQ10_ALIDB
scnpilot_p_inoc_scaffold_323_curated_68
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82321..83034
DNA (714bp) protein (238aa)
UPF0502 protein Alide_1182 n=2 Tax=Alicycliphilus denitrificans RepID=E8TQ09_ALIDB
hypothetical protein; K09915 hypothetical protein
UPF0502 protein Alide_1182 {ECO:0000256|HAMAP-Rule:MF_01584}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_323_curated_69
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83080..84261
DNA (1182bp) protein (394aa)
acyl-CoA dehydrogenase domain-containing protein; K00257 [EC:1.3.99.-]
acyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371AE53
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:GAD20650.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_323_curated_70
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84306..85421
DNA (1116bp) protein (372aa)
acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQ07_ALIDB
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ADU98941.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_323_curated_71
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85555..86112)
DNA (558bp) protein (186aa)
HNH endonuclease id=12553123 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
HNH endonuclease
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_72
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86286..87320
DNA (1035bp) protein (345aa)
bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2) id=12553122 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_73
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87420..90278
DNA (2859bp) protein (953aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Isoleucine--tRNA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQ04_ALIDB
scnpilot_p_inoc_scaffold_323_curated_74
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90281..90799
DNA (519bp) protein (173aa)
lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] id=12553120 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_75
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90953..92626
DNA (1674bp) protein (558aa)
Na/Pi-cotransporter II-related protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MED2_ACIET
na/pi-cotransporter ii-like protein; K03324 phosphate:Na+ symporter
Na/Pi-cotransporter II-related protein {ECO:0000313|EMBL:ACM34171.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_323_curated_76
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(92630..93685)
DNA (1056bp) protein (352aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1268622 species="Bacteria; Proteobacteria; Betapro
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
UGMP family protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F6AC5
scnpilot_p_inoc_scaffold_323_curated_77
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93750..95426)
DNA (1677bp) protein (559aa)
methyl-accepting chemotaxis sensory transducer id=12553118 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
methyl-accepting chemotaxis sensory transducer
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_78
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95548..96405
DNA (858bp) protein (286aa)
squalene synthase hpnd (EC:2.5.1.32); K02291 phytoene synthase [EC:2.5.1.32]
Squalene synthase hpnd {ECO:0000313|EMBL:GAO20778.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
squalene/phytoene synthase id=12553117 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_323_curated_79
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96417..97727
DNA (1311bp) protein (437aa)
UDP-galactopyranose mutase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5A8_ACISJ
Amine oxidase {ECO:0000313|EMBL:GAO20779.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
amine oxidase
scnpilot_p_inoc_scaffold_323_curated_80
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97764..98672)
DNA (909bp) protein (303aa)
biotin synthesis protein BioC id=12549781 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
biotin synthesis protein BioC
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_81
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98726..99457
DNA (732bp) protein (244aa)
phosphoribosyltransferase n=1 Tax=Acidovorax avenae RepID=UPI0002E0AD2B
phosphoribosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_82
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99471..99941
DNA (471bp) protein (157aa)
TrmH family RNA methyltransferase; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CJV6_VARPS
scnpilot_p_inoc_scaffold_323_curated_83
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99945..100886)
DNA (942bp) protein (314aa)
LysR family transcriptional regulator id=12549778 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_84
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101087..101551)
DNA (465bp) protein (155aa)
dehydratase id=12549777 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
dehydratase
Dehydratase {ECO:0000313|EMBL:AFU47550.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_323_curated_85
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101606..102223)
DNA (618bp) protein (206aa)
cobyrinic acid a,c-diamide synthase id=12549776 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cobyrinic acid a,c-diamide synthase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_86
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102316..102954)
DNA (639bp) protein (213aa)
Lysine exporter protein LysE/YggA n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTH8_9BURK
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EHL24244.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
lysine exporter protein LysE/YggA
scnpilot_p_inoc_scaffold_323_curated_87
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103040..103474
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Y1_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:KJA09240.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_323_curated_88
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103643..104305)
DNA (663bp) protein (221aa)
class I cytochrome c id=12549765 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cytochrome c class I
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_curated_89
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104425..105279
DNA (855bp) protein (285aa)
MoxR-like ATPase n=1 Tax=Acidovorax sp. CF316 RepID=J0KKA0_9BURK
MoxR-like ATPase {ECO:0000313|EMBL:EJE51623.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
ATPase central domain-containing protein
scnpilot_p_inoc_scaffold_323_curated_90
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105326..105556
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9U4_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER58753.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
Displaying items 61-90 of 92 in total

View Taxonomy