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scnpilot_p_inoc_scaffold_323_curated_82

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 99471..99941

Top 3 Functional Annotations

Value Algorithm Source
TrmH family RNA methyltransferase; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 153.0
  • Bit_score: 257
  • Evalue 2.20e-66
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 153.0
  • Bit_score: 257
  • Evalue 9.70e-66
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CJV6_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 153.0
  • Bit_score: 257
  • Evalue 6.90e-66

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGTTCCACATCGTTCTGGTCGAACCCGAGATCCCGCCCAACACGGGCAATGTGATCCGCCTCGCGGCGAACACGGGCTGCACGCTGCACCTGGTCGAGCCGCTGGGCTTTTCCATGGAGGACCGCCTGATGCGCCGCGCCGGGCTGGACTACCACGAGTACGCCACGGTGCTGCGCCACGCCGACTGGAACGCCCTGCTGCAGTCGCAGCAGCCCGAGCGTGCGCGCATGTTCGCCCTGACGACCCAGGGTACGGGCCAGGTCCACGGCACGCGCTTTGCGCCGGGGGACTGGCTGGTGTTCGGCGCCGAGTCGCGCGGGCTGCCGCCTGCGCTGCAGGCGGCGTTTGCGCCGCCGCAGCGGTTGCGCCTGCCCATGCAGCCGGGCCAGCGCAGCCTCAACCTCTCCAACGCCGTGGCGGTGACGGTGTTCGAGGCCTGGCGGCAGAACGGCTTTGCCGGGGCGGCCTGA
PROTEIN sequence
Length: 157
MFHIVLVEPEIPPNTGNVIRLAANTGCTLHLVEPLGFSMEDRLMRRAGLDYHEYATVLRHADWNALLQSQQPERARMFALTTQGTGQVHGTRFAPGDWLVFGAESRGLPPALQAAFAPPQRLRLPMQPGQRSLNLSNAVAVTVFEAWRQNGFAGAA*