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scnpilot_p_inoc_scaffold_814_curated

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_814_curated_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..493)
DNA (492bp) protein (164aa)
Uroporphyrinogen decarboxylase {ECO:0000256|RuleBase:RU000554, ECO:0000256|SAAS:SAAS00078187}; EC=4.1.1.37 {ECO:0000256|RuleBase:RU000554, ECO:0000256|SAAS:SAAS00078176};; Flags: Fragment;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBI9_ACIDE
scnpilot_p_inoc_scaffold_814_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(511..1494)
DNA (984bp) protein (328aa)
Porin Gram-negative type n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWJ7_9BURK
outer membrane protein (porin)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1657..3897)
DNA (2241bp) protein (747aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQ18_DELAS
cytochrome c biogenesis protein transmembrane region
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4019..4768)
DNA (750bp) protein (250aa)
Threonyl/alanyl tRNA synthetase, SAD n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWJ3_9BURK
Threonyl/alanyl tRNA synthetase, SAD {ECO:0000313|EMBL:EHL23336.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
threonyl/alanyl tRNA synthetase
scnpilot_p_inoc_scaffold_814_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4819..5337
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KR07_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5367..6215
DNA (849bp) protein (283aa)
creatininase; K01470 creatinine amidohydrolase [EC:3.5.2.10] id=12552817 bin=BDI species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
creatininase; K01470 creatinine amidohydrolase [EC:3.5.2.10]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7017..7688)
DNA (672bp) protein (224aa)
phosphoglycerate mutase id=12551722 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
phosphoglycerate mutase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7760..8731)
DNA (972bp) protein (324aa)
hypothetical protein id=12551721 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8758..9606)
DNA (849bp) protein (283aa)
phenazine biosynthesis protein phzf family; K06998 id=12551720 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
phenazine biosynthesis protein phzf family; K06998
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9708..10571)
DNA (864bp) protein (288aa)
phenazine biosynthesis protein phzf family id=12551719 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
phenazine biosynthesis protein phzf family
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10638..11816)
DNA (1179bp) protein (393aa)
GntR family transcriptional regulator id=12551718 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11945..12844)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGF5_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34550.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_814_curated_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12841..13440)
DNA (600bp) protein (200aa)
hypothetical protein id=12551716 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_14

Not on your lists

13557..15020
DNA (1464bp) protein (488aa)
Transcriptional regulator, GntR family domain / Aspartate aminotransferase {ECO:0000313|EMBL:AGC70981.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AGC70981.1};; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
Transcriptional regulator, GntR family domain / Aspartate aminotransferase n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VUN5_9BACT
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_814_curated_15

Not on your lists

comp(15034..16269)
DNA (1236bp) protein (412aa)
Putative signal transduction protein n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VXU7_9BACT
Putative signal transduction protein {ECO:0000313|EMBL:AGC70980.1}; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
signal transduction protein
scnpilot_p_inoc_scaffold_814_curated_16

Not on your lists

comp(16269..17525)
DNA (1257bp) protein (419aa)
Flagellar hook-associated protein FlgL n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VU72_9BACT
Flagellar hook-associated protein FlgL {ECO:0000313|EMBL:AGC70979.1}; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar hook-associated protein 3; K02397 flagellar hook-associated protein 3 FlgL
scnpilot_p_inoc_scaffold_814_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17548..19509)
DNA (1962bp) protein (654aa)
Flagellar hook-associated protein FlgK n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWG4_9BURK
flagellar hook-associated protein FlgK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_18

Not on your lists

comp(19604..20515)
DNA (912bp) protein (304aa)
flagellar rod assembly protein/muramidase FlgJ id=12553415 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Flagellar protein FlgJ peptidoglycan hydrolase {ECO:0000313|EMBL:AGC70977.1}; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar rod assembly protein/muramidase FlgJ; K02395 flagellar protein FlgJ
scnpilot_p_inoc_scaffold_814_curated_19

Not on your lists

comp(20566..21717)
DNA (1152bp) protein (384aa)
Flagellar P-ring protein n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VUN1_9BACT
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flgI; flagellar basal body P-ring protein
scnpilot_p_inoc_scaffold_814_curated_20

Not on your lists

comp(21930..22628)
DNA (699bp) protein (233aa)
Flagellar L-ring protein n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VXU4_9BACT
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar L-ring protein
scnpilot_p_inoc_scaffold_814_curated_21

Not on your lists

comp(22663..23445)
DNA (783bp) protein (261aa)
Flagellar basal-body rod protein FlgG n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VU69_9BACT
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:AGC70974.1}; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar basal-body rod protein FlgG
scnpilot_p_inoc_scaffold_814_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23464..24204)
DNA (741bp) protein (247aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9D3_9BURK
flagellar basal-body rod protein FlgF
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:AFU47879.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_814_curated_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24239..25471)
DNA (1233bp) protein (411aa)
Flagellar hook protein FlgE n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWF6_9BURK
hypothetical protein; K02390 flagellar hook protein FlgE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_814_curated_24

Not on your lists

comp(25502..26167)
DNA (666bp) protein (222aa)
Flagellar basal-body rod modification protein FlgD n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VUM6_9BACT
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:AGC70971.1}; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar hook capping protein
scnpilot_p_inoc_scaffold_814_curated_25

Not on your lists

comp(26184..26588)
DNA (405bp) protein (135aa)
Flagellar basal-body rod protein FlgC n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VXU0_9BACT
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar basal body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
scnpilot_p_inoc_scaffold_814_curated_26

Not on your lists

comp(26613..27041)
DNA (429bp) protein (143aa)
Flagellar basal body rod protein FlgB n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VU66_9BACT
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar basal-body rod protein FlgB
scnpilot_p_inoc_scaffold_814_curated_27

Not on your lists

27258..27989
DNA (732bp) protein (244aa)
Flagellar basal-body P-ring formation protein FlgA n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VVD3_9BACT
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagella basal body P-ring formation protein FlgA; K02386 flagella basal body P-ring formation protein FlgA
scnpilot_p_inoc_scaffold_814_curated_28

Not on your lists

28082..28411
DNA (330bp) protein (110aa)
Anti-sigma-28 factor, FlgM n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VPZ9_9BACT
Anti-sigma-28 factor, FlgM {ECO:0000313|EMBL:AGC70967.1}; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar biosynthesis anti-sigma factor protein FlgM; K02398 negative regulator of flagellin synthesis FlgM
scnpilot_p_inoc_scaffold_814_curated_29

Not on your lists

28511..28807
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VUM2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC70966.1}; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
hypothetical protein
scnpilot_p_inoc_scaffold_814_curated_30
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28814..29536)
DNA (723bp) protein (241aa)
RNA polymerase sigma-28 subunit FliA/WhiG id=12553402 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
RNA polymerase sigma-28 subunit FliA/WhiG
Displaying items 1-30 of 49 in total

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