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scnpilot_p_inoc_scaffold_9_curated

Search features with annotation key words

Displaying items 391-420 of 528 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_9_curated_391
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(449454..449759)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYF3_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91632.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_392
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

450191..450514
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000360DF66
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91633.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_393
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

450854..451408
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003759FCD
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEI51226.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_9_curated_394
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

451431..452426
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000381EE48
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEI51227.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_9_curated_395
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

452557..455994
DNA (3438bp) protein (1146aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035F59F8
TonB-dependent receptor {ECO:0000313|EMBL:EPR67650.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_9_curated_396
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

456034..457476
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036BDD55
RagB/SusD domain-containing protein
Putative nutrient binding outer membrane protein {ECO:0000313|EMBL:EPR67651.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
scnpilot_p_inoc_scaffold_9_curated_397
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

457482..457958
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036B28A5
Uncharacterized protein {ECO:0000313|EMBL:KGE86473.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
scnpilot_p_inoc_scaffold_9_curated_398
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

457970..461515
DNA (3546bp) protein (1182aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000373D119
RNA-binding protein {ECO:0000313|EMBL:KIC94207.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ASPIC/UnbV-like protein
scnpilot_p_inoc_scaffold_9_curated_399
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(461570..464254)
DNA (2685bp) protein (895aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
DNA ligase D n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYF5_DYAFD
DNA ligase D {ECO:0000313|EMBL:ACT91634.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_400
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(464453..465214)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYF6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91635.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_401
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

465331..465690
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003703A62
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91636.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_402
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

465788..467188
DNA (1401bp) protein (467aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Histidine kinase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYF8_DYAFD
histidine kinase
scnpilot_p_inoc_scaffold_9_curated_403
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

467224..468885
DNA (1662bp) protein (554aa)
response regulator receiver modulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYF9_DYAFD
Response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACT91638.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_404
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

468888..469154
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYG0_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91639.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_405
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

469173..470081
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036BBAEB
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHQ31159.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_9_curated_406
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

470174..470938
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000376EEFB
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AFD07160.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_9_curated_407
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(471022..471648)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E72B9
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ACT91640.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_408
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

471838..472263
DNA (426bp) protein (142aa)
Response regulator receiver protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYG2_DYAFD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACT91641.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_409
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

472266..473603
DNA (1338bp) protein (446aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYG3_DYAFD
two component sigma-54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACT91642.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_410
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

473612..474994
DNA (1383bp) protein (461aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYH2_DYAFD
PAS/PAC sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_9_curated_411
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

475106..475477
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYH3_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91652.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_412
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

475640..478003
DNA (2364bp) protein (788aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036A3047
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91653.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_413
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(478007..480118)
DNA (2112bp) protein (704aa)
metallophosphoesterase n=1 Tax=Dyadobacter beijingensis RepID=UPI000369F8A2
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACT91654.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_414
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(480115..481899)
DNA (1785bp) protein (595aa)
cytochrome-c peroxidase; K00428 cytochrome c peroxidase [EC:1.11.1.5]
Cytochrome-c peroxidase {ECO:0000313|EMBL:ACT91655.1}; EC=1.11.1.5 {ECO:0000313|EMBL:ACT91655.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000360F5F0
scnpilot_p_inoc_scaffold_9_curated_415
unknown

Not on your lists

comp(482036..482185)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_curated_416
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

482216..482869
DNA (654bp) protein (218aa)
AraC family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI0003713135
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT91657.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_417
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(482875..483291)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYH9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91658.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_418
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(483358..483900)
DNA (543bp) protein (181aa)
CheB methylesterase; K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
CheB methylesterase {ECO:0000313|EMBL:ACT91659.1}; EC=3.1.1.61 {ECO:0000313|EMBL:ACT91659.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
chemotaxis protein CheB n=1 Tax=Dyadobacter beijingensis RepID=UPI00037BDFCD
scnpilot_p_inoc_scaffold_9_curated_419
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(483921..484730)
DNA (810bp) protein (270aa)
CheR-type MCP methyltransferase; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:ACT91660.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ACT91660.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
MCP methyltransferase, CheR-type n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYI1_DYAFD
scnpilot_p_inoc_scaffold_9_curated_420
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(484735..485100)
DNA (366bp) protein (122aa)
Response regulator receiver protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYI2_DYAFD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACT91661.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 391-420 of 528 in total

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