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scnpilot_p_inoc_scaffold_9_curated_393

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 450854..451408

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003759FCD similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 184.0
  • Bit_score: 341
  • Evalue 7.30e-91
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 185.0
  • Bit_score: 213
  • Evalue 5.50e-53
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEI51226.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 185.0
  • Bit_score: 213
  • Evalue 2.50e-52

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
ATGAATAAAATTTTAACCGACGAACAGCTGATAGTACAGCTCCGCGAAGGCAACAAGCGTGCTTTCGAGGAAATCTACGACCGGTACTGGTACAAGCTGTTCTGCATTGCCTATCATCAGGTAGGGTCGCGGGAGGAGTCGGAGGAACTGGTGCACGACATATATGAAAGCCTTTGGAACAATCGGCAGAAGACAGAGATCCGCAGCCTGAGTACTTACCTGGTGATCGCGATGAAGTATCGGATCACCAATTTTATCAAATCGCAGATCACCTGGCGCCGGTATCAGGAGTATCTAATCCTGAATAAGATACAAGAGACGTATTCGGCCGACGAGATCGTGCAGTTCTCGGACCTTTCGCGCGCTGTGGACGAGGTGATGCGCAAGCTGCCGGAAAAAACGAGCCGCGTATTCCAGTTAAGCCGTTTCGAAAACCGGCCTGTAAAAGAAATCGCCGACGAACTTAATATCTCCGAAAAAGCCGTCGAATACCACATTACCAAATCACTGAAAGCATTAAGAGAAAATCTCTGGATGTATTATTCCAGCAACTAA
PROTEIN sequence
Length: 185
MNKILTDEQLIVQLREGNKRAFEEIYDRYWYKLFCIAYHQVGSREESEELVHDIYESLWNNRQKTEIRSLSTYLVIAMKYRITNFIKSQITWRRYQEYLILNKIQETYSADEIVQFSDLSRAVDEVMRKLPEKTSRVFQLSRFENRPVKEIADELNISEKAVEYHITKSLKALRENLWMYYSSN*