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scnpilot_p_inoc_scaffold_101_curated

Search features with annotation key words

Displaying items 121-150 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_101_curated_121
unknown

Not on your lists

comp(140581..142209)
DNA (1629bp) protein (543aa)
hypothetical protein
scnpilot_p_inoc_scaffold_101_curated_122
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

142308..143285
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003745093
NHL repeat containing protein
NHL repeat containing protein {ECO:0000313|EMBL:ADB39833.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_101_curated_123
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(143362..144279)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPQ9_CHIPD
hypothetical protein; K08994 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KEQ31020.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
scnpilot_p_inoc_scaffold_101_curated_124
unknown

Not on your lists

144311..144409
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_101_curated_125
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

144432..145070
DNA (639bp) protein (213aa)
Semialdehyde dehydrogenase NAD-binding n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PME7_CHIPD
semialdehyde dehydrogenase NAD-binding
Semialdehyde dehydrogenase NAD-binding {ECO:0000313|EMBL:ACU64052.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_101_curated_126
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

145149..145715
DNA (567bp) protein (189aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y113_9SPHI
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EHQ29648.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_101_curated_127
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

145777..146145
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000373B411
Glyoxalase {ECO:0000313|EMBL:ETZ20728.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_p_inoc_scaffold_101_curated_128
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

146350..147660
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W157_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91914.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_129
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

147703..148977
DNA (1275bp) protein (425aa)
membrane dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19]
Membrane dipeptidase {ECO:0000313|EMBL:ACT91913.1}; EC=3.4.13.19 {ECO:0000313|EMBL:ACT91913.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Membrane dipeptidase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W156_DYAFD
scnpilot_p_inoc_scaffold_101_curated_130
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(149048..149734)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EJ47_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KEQ28392.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_p_inoc_scaffold_101_curated_131
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

149954..151786
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036F90F7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49072.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_101_curated_132
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

151793..154750
DNA (2958bp) protein (986aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003815F11
WD-40 repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_101_curated_133
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(154702..157983)
DNA (3282bp) protein (1094aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003656315
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:AEE53330.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_101_curated_134
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

158011..162138
DNA (4128bp) protein (1376aa)
(myosin heavy-chain) kinase (EC:2.7.11.7)
(Myosin heavy-chain) kinase {ECO:0000313|EMBL:AEE54378.1}; EC=2.7.11.7 {ECO:0000313|EMBL:AEE54378.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
(Myosin heavy-chain) kinase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L7M0_HALH1
scnpilot_p_inoc_scaffold_101_curated_135
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(162135..166070)
DNA (3936bp) protein (1312aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLI7_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC96278.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
peptidase C14 caspase catalytic subunit p20
scnpilot_p_inoc_scaffold_101_curated_136
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

166181..166966
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036405CF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFF21661.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
scnpilot_p_inoc_scaffold_101_curated_137
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

Not on your lists

comp(167027..167368)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000374FB92
Uncharacterized protein {ECO:0000313|EMBL:ESO07880.1, ECO:0000313|EnsemblMetazoa:HelroP169578}; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella.;" source="Helobdella robusta (Californian leech).;"
hypothetical protein
scnpilot_p_inoc_scaffold_101_curated_138
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

167612..169135
DNA (1524bp) protein (508aa)
sulfatase (EC:3.1.6.-)
POSSIBLE HYDROLASE n=1 Tax=Kordia algicida OT-1 RepID=A9DMT4_9FLAO
POSSIBLE HYDROLASE {ECO:0000313|EMBL:EDP97782.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
scnpilot_p_inoc_scaffold_101_curated_139
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

169302..171683
DNA (2382bp) protein (794aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003801353
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB40605.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_101_curated_140
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

171752..172669
DNA (918bp) protein (306aa)
protein tyrosine/serine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035EC492
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:ACT91909.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_141
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

172740..173789
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HA46_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB91462.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
scnpilot_p_inoc_scaffold_101_curated_142
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

173799..174551
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2I0S1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AIM38847.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_p_inoc_scaffold_101_curated_143
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

174569..176431
DNA (1863bp) protein (621aa)
Peptidase M61 domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSI1_DYAFD
peptidase M61 domain-containing protein
Peptidase M61 domain protein {ECO:0000313|EMBL:ACT92803.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_144
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(176459..179074)
DNA (2616bp) protein (872aa)
Pyruvate, water dikinase (EC:2.7.9.2)
Pyruvate phosphate dikinase PEP/pyruvate-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U833_9CHLR
Pyruvate phosphate dikinase PEP/pyruvate-binding {ECO:0000313|EMBL:EFH80044.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
scnpilot_p_inoc_scaffold_101_curated_145
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(179082..179537)
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W149_DYAFD
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACT91906.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_146
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

179779..180456
DNA (678bp) protein (226aa)
RNA polymerase subunit sigma-24 n=1 Tax=Dyadobacter beijingensis RepID=UPI000363A358
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT91905.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_147
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

180502..181521
DNA (1020bp) protein (340aa)
Anti-FecI sigma factor, FecR n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0H0_DYAFD
FecR anti-FecI sigma factor
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACT91904.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_148
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

181542..184916
DNA (3375bp) protein (1125aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0G9_DYAFD
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT91903.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_149
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

184952..186565
DNA (1614bp) protein (538aa)
starch-binding protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000364E2DE
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACT91902.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_150
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

186568..187641
DNA (1074bp) protein (358aa)
glycosylase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036468F2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91901.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 121-150 of 183 in total

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