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scnpilot_p_inoc_scaffold_101_curated

Search features with annotation key words

Displaying items 31-60 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_101_curated_31
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36931..37644
DNA (714bp) protein (238aa)
ABC transporter permease n=1 Tax=Spirosoma panaciterrae RepID=UPI0003612D11
cytochrome C assembly protein
Cytochrome c assembly protein {ECO:0000313|EMBL:ADB39830.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_101_curated_32
unknown

Not on your lists

37641..37865
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_101_curated_33
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

38157..38711
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000360D7A4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95768.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_34
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38822..40207
DNA (1386bp) protein (462aa)
OMA87 related protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRI1_9FLAO
OMA87 related protein {ECO:0000313|EMBL:EIA08964.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
putative signal peptide
scnpilot_p_inoc_scaffold_101_curated_35
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(40234..41334)
DNA (1101bp) protein (367aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUK4_DYAFD
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACT91313.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_36
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41353..42645)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000374D08B
Contig29, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77826.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_101_curated_37
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42633..43307)
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNA6_CHIPD
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU62316.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_101_curated_38
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

43589..45529
DNA (1941bp) protein (647aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E8A1C
Sulfatase {ECO:0000313|EMBL:KIF31750.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
scnpilot_p_inoc_scaffold_101_curated_39
unknown

Not on your lists

45555..45749
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_101_curated_40
unknown

Not on your lists

46039..46752
DNA (714bp) protein (238aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_101_curated_41
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

47048..47737
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KHN5_9BACT
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:CCH03638.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_101_curated_42
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

47734..49050
DNA (1317bp) protein (439aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00036A7577
histidine kinase
scnpilot_p_inoc_scaffold_101_curated_43
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

49128..51920
DNA (2793bp) protein (931aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000369BE1F
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADB42334.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_101_curated_44
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

51973..53406
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QU51_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42333.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_101_curated_45
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53460..55313
DNA (1854bp) protein (618aa)
Phosphohydrolase id=4272898 bin=GWF2_Bacteroidetes_39_10 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_p_inoc_scaffold_101_curated_46
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

55581..58076
DNA (2496bp) protein (832aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00036C0488
TonB-dependent receptor {ECO:0000313|EMBL:AKD58216.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_101_curated_47
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

58460..58993
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000373791C
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor (Possible RNA polymerase sigma-24 factor) {ECO:0000313|EMBL:ABG57554.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
scnpilot_p_inoc_scaffold_101_curated_48
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

59084..60031
DNA (948bp) protein (316aa)
Putative anti-sigma factor n=1 Tax=Pedobacter sp. BAL39 RepID=A6ECP7_9SPHI
Contig7, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78679.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
FecR anti-FecI sigma factor
scnpilot_p_inoc_scaffold_101_curated_49
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

60028..62802
DNA (2775bp) protein (925aa)
TonB-denpendent receptor n=1 Tax=Dyadobacter beijingensis RepID=UPI00037109B0
TonB-dependent receptor {ECO:0000313|EMBL:KEQ29544.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_101_curated_50
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

62837..65344
DNA (2508bp) protein (836aa)
TonB-denpendent receptor n=1 Tax=Dyadobacter beijingensis RepID=UPI00037109B0
TonB-dependent receptor {ECO:0000313|EMBL:KEQ29544.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_101_curated_51
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

65381..66079
DNA (699bp) protein (233aa)
Putative lipoprotein n=1 Tax=Ralstonia syzygii R24 RepID=G3A5F5_9RALS
Membrane protein {ECO:0000313|EMBL:KEQ29545.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
lipoprotein transmembrane
scnpilot_p_inoc_scaffold_101_curated_52
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

66113..66844
DNA (732bp) protein (244aa)
Conserved hypothetical periplasmic protein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0LCE3_ZOBGA
periplasmic protein
Conserved hypothetical periplasmic protein {ECO:0000313|EMBL:CAZ96871.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
scnpilot_p_inoc_scaffold_101_curated_53
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

67055..69406
DNA (2352bp) protein (784aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036B342A
TonB-dependent receptor {ECO:0000313|EMBL:EFK34634.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_101_curated_54
unknown

Not on your lists

comp(69407..69688)
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_101_curated_55
unknown

Not on your lists

comp(69849..70163)
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_101_curated_56
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(70160..72577)
DNA (2418bp) protein (806aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037A4948
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor {ECO:0000313|EMBL:ADB40512.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_101_curated_57
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(72555..73898)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036179D6
Vitamin K-dependent gamma-carboxylase
Vitamin K-dependent gamma-carboxylase {ECO:0000313|EMBL:ADB40511.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_101_curated_58
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(73920..75068)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000377C1EA
peptidase M75, Imelysin
Peptidase M75, Imelysin {ECO:0000313|EMBL:ADB40510.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_101_curated_59
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(75131..76300)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036C4DB2
Uncharacterized protein {ECO:0000313|EMBL:GAL85495.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
scnpilot_p_inoc_scaffold_101_curated_60
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(76385..77056)
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2S6_9FLAO
Response regulator receiver domain protein {ECO:0000313|EMBL:EFK34637.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
winged helix family two component transcriptional regulator
Displaying items 31-60 of 183 in total

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