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scnpilot_p_inoc_scaffold_101_curated

Search features with annotation key words

Displaying items 1-30 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_101_curated_1
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(252..1427)
DNA (1176bp) protein (392aa)
Putative ATPase n=1 Tax=Beggiatoa alba B18LD RepID=I3CIR8_9GAMM
Putative ATPase {ECO:0000313|EMBL:EIJ43511.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ATPase-like protein
scnpilot_p_inoc_scaffold_101_curated_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2350..3669
DNA (1320bp) protein (440aa)
Integrase family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3B9_DYAFD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACT92223.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3970..5082)
DNA (1113bp) protein (371aa)
Membrane fusion protein mtrC n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG17_9BACT
Membrane fusion protein mtrC {ECO:0000313|EMBL:CCH52842.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_101_curated_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5084..8263)
DNA (3180bp) protein (1060aa)
Nodulation protein nolG n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG16_9BACT
Nodulation protein nolG {ECO:0000313|EMBL:CCH52841.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
acriflavin resistance protein
scnpilot_p_inoc_scaffold_101_curated_5
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8276..9601)
DNA (1326bp) protein (442aa)
Outer membrane efflux protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG15_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:CCH52840.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
outer membrane efflux protein
scnpilot_p_inoc_scaffold_101_curated_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9806..10483
DNA (678bp) protein (226aa)
Transcriptional regulatory protein cusR n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG13_9BACT
Transcriptional regulatory protein cusR {ECO:0000313|EMBL:CCH52838.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_101_curated_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10480..11859
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Histidine kinase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG12_9BACT
histidine kinase
scnpilot_p_inoc_scaffold_101_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11856..12575)
DNA (720bp) protein (240aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W252_DYAFD
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACT92025.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12572..13597)
DNA (1026bp) protein (342aa)
Signal transduction histidine kinase, LytS n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W251_DYAFD
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACT92024.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13842..14228
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W250_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92023.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_101_curated_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14225..15274
DNA (1050bp) protein (350aa)
Beta-lactamase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ16_CHIPD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACU60100.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_101_curated_12
Capnocytophaga sputigena, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15940..18000
DNA (2061bp) protein (687aa)
TonB-dependent siderophore receptor n=1 Tax=Capnocytophaga sp. oral taxon 329 str. F0087 RepID=F3XMY2_9FLAO
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EEB65630.1}; TaxID=553177 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sputigena ATCC 33612.;"
putative TonB-dependent Iron(III) dicitrate transport protein FecA; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_101_curated_13
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18349..19119)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3Z019_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:EZH75410.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical protein
scnpilot_p_inoc_scaffold_101_curated_14
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19121..20029)
DNA (909bp) protein (303aa)
Sulfate-transporting ATPase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYU5_HALH1
Sulfate-transporting ATPase {ECO:0000313|EMBL:AHM58807.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
sulfate-transporting ATPase; K09687 antibiotic transport system ATP-binding protein
scnpilot_p_inoc_scaffold_101_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20080..21387
DNA (1308bp) protein (436aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TER0_NIAKG
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEW00496.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_101_curated_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21384..22082
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000374DEDE
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:AKD57350.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
LytTR family two component transcriptional regulator
scnpilot_p_inoc_scaffold_101_curated_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22090..23130
DNA (1041bp) protein (347aa)
Beta-lactamase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YD26_9SPHI
Beta-lactamase {ECO:0000313|EMBL:EHQ26083.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
beta-lactamase
scnpilot_p_inoc_scaffold_101_curated_18
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

23205..24059
DNA (855bp) protein (285aa)
Polysaccharide deacetylase id=2962422 bin=GWA2_Elusi_like_61_42 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
polysaccharide deacetylase
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
scnpilot_p_inoc_scaffold_101_curated_19
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24104..26479)
DNA (2376bp) protein (792aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVL4_EMTOG
protein of unknown function DUF214
Uncharacterized protein {ECO:0000313|EMBL:AFK03717.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_p_inoc_scaffold_101_curated_20
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26640..26900)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000349D97E
Strain DSM 12611 Contig13, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51890.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_101_curated_21
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26901..28967)
DNA (2067bp) protein (689aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000349D97E
Strain DSM 12611 Contig13, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51890.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_101_curated_22
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29081..29857)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000349C55C
Uncharacterized protein {ECO:0000313|EMBL:EID72407.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_101_curated_23
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29862..30773)
DNA (912bp) protein (304aa)
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEE51487.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEE51487.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Sulfate-transporting ATPase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYU5_HALH1
sulfate-transporting ATPase; K09687 antibiotic transport system ATP-binding protein
scnpilot_p_inoc_scaffold_101_curated_24
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30902..31579)
DNA (678bp) protein (226aa)
chemotaxis protein CheY n=1 Tax=Cytophagales str. B6 RepID=UPI0003B432C0
Chemotaxis protein CheY {ECO:0000313|EMBL:AKD04438.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
two-component system-response regulator
scnpilot_p_inoc_scaffold_101_curated_25
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31572..32615)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000379EA45
Histidine kinase {ECO:0000313|EMBL:AKD04439.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
signal transduction histidine kinase, lyts
scnpilot_p_inoc_scaffold_101_curated_26
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32778..33383
DNA (606bp) protein (202aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3Z028_AEQSU
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AFL82596.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
scnpilot_p_inoc_scaffold_101_curated_27
unknown

Not on your lists

33380..33865
DNA (486bp) protein (162aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_101_curated_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33887..34312
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036EE314
Uncharacterized protein {ECO:0000313|EMBL:KIC93121.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_101_curated_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34588..35721
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000381AAED
Uncharacterized protein {ECO:0000313|EMBL:KIC93120.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
peptidase S41
scnpilot_p_inoc_scaffold_101_curated_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35733..36563)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYD4_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91613.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 1-30 of 183 in total

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