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scnpilot_p_inoc_scaffold_101_curated_47

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 58460..58993

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000373791C similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 164.0
  • Bit_score: 152
  • Evalue 4.60e-34
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 163.0
  • Bit_score: 142
  • Evalue 1.50e-31
RNA polymerase sigma factor (Possible RNA polymerase sigma-24 factor) {ECO:0000313|EMBL:ABG57554.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 163.0
  • Bit_score: 142
  • Evalue 6.70e-31

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Taxonomy

Cytophaga hutchinsonii → Cytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 534
ATGCTTGACGAAGGCCATCAGCATGATTTCGCTACCAAGCGGGGTTTCGCGGCTATTTACAATATCATGTGGCGGAAGCTCTATAACATATGTTTTCATCACACGTCGAACAAACATCTTGCCGAAGAGCTTGTCCAGGAAATCTTCAAATCGCTCTGGGAACGCAGAGAGACCTTAAAAATAGAGGGCAGTATCGAGAACTACCTTTCACGTGCAGCCAGACTTAAAGTAGCCGAGCACTTCCGCAACCAGGCAATCCGTGCAAGAAACCTTCAAGACGCAATCCAAGATCATCCGCTGGCAGAAAATACGACCCAACAGATGCTGGACCTGCATTTTCTCGACGAACGCATCACCTCTTTGGTTGATCAGCTTCCAAGCCACTGCAGGCAAGTATATGTAATGAGCCGCCATGAGGGCCTTTCAAACACGCAGATCGCCAGCTCTATGTCCATTTCAGAAAAAACGGTAGAGAACCAGATTGGCAGGGCGCTGAGCTATCTGAGAAAAAGACTTGCCAACCTTTTAAAATAA
PROTEIN sequence
Length: 178
MLDEGHQHDFATKRGFAAIYNIMWRKLYNICFHHTSNKHLAEELVQEIFKSLWERRETLKIEGSIENYLSRAARLKVAEHFRNQAIRARNLQDAIQDHPLAENTTQQMLDLHFLDERITSLVDQLPSHCRQVYVMSRHEGLSNTQIASSMSISEKTVENQIGRALSYLRKRLANLLK*