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scnpilot_p_inoc_scaffold_14_curated

Search features with annotation key words

Displaying items 241-270 of 497 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_14_curated_241
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

256224..257426
DNA (1203bp) protein (401aa)
GTP-binding protein HflX (EC:3.1.5.-); K03665 GTP-binding protein HflX
GTPase HflX n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK10_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_242
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

257477..259477
DNA (2001bp) protein (667aa)
Pyruvate dehydrogenase (EC:1.2.4.1); K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:AEA42519.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEA42519.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFR1_FLUTR
scnpilot_p_inoc_scaffold_14_curated_243
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(259561..260298)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036D0FDB
ABC transporter-like protein
DNA translocase FtsK {ECO:0000313|EMBL:CDM68309.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
scnpilot_p_inoc_scaffold_14_curated_244
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(260409..261419)
DNA (1011bp) protein (337aa)
Cytochrome-c peroxidase (EC:1.11.1.5); K00428 cytochrome c peroxidase [EC:1.11.1.5]
Cytochrome-c peroxidase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9G9_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_245
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(261474..262298)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9H0_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_246
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(262335..262706)
DNA (372bp) protein (124aa)
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_247
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(262718..263635)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00035C26CF
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_248
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(263825..264199)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E9K6_9SPHI
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_249
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(264392..265351)
DNA (960bp) protein (320aa)
2-nitropropane dioxygenase NPD; K00459 nitronate monooxygenase [EC:1.13.12.16]
Uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 10230 RepID=H1GQ98_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHO06087.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
scnpilot_p_inoc_scaffold_14_curated_250
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

265443..267368
DNA (1926bp) protein (642aa)
ABC transporter related protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBH2_FLUTR
ABC transporter-like protein; K06158 ATP-binding cassette, subfamily F, member 3
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_251
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

267365..268156
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBH3_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_252
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(268175..268702)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034548D5
DNA-binding protein {ECO:0000313|EMBL:KIA91210.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_14_curated_253
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

268879..269760
DNA (882bp) protein (294aa)
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJF2_FLUTR
scnpilot_p_inoc_scaffold_14_curated_254
unknown

Not on your lists

comp(269946..270530)
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_14_curated_255
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(270718..272988)
DNA (2271bp) protein (757aa)
aconitase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitase {ECO:0000313|EMBL:AEA42969.1}; EC=4.2.1.3 {ECO:0000313|EMBL:AEA42969.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Aconitase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK70_FLUTR
scnpilot_p_inoc_scaffold_14_curated_256
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(273324..276089)
DNA (2766bp) protein (922aa)
Aconitate hydratase (EC:4.2.1.3); K01682 aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
aconitate hydratase n=1 Tax=Empedobacter brevis RepID=UPI0003752542
Aconitate hydratase {ECO:0000313|EMBL:KIA92203.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
scnpilot_p_inoc_scaffold_14_curated_257
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

276414..277910
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHB6_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_258
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

277865..278626
DNA (762bp) protein (254aa)
Serine 3-dehydrogenase (EC:1.1.1.276)
short-chain dehydrogenase n=1 Tax=Butyricimonas synergistica RepID=UPI0003801725
Short-chain dehydrogenase {ECO:0000313|EMBL:KIO45938.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
scnpilot_p_inoc_scaffold_14_curated_259
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

278623..280200
DNA (1578bp) protein (526aa)
Amidohydrolase 3 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHB4_FLUTR
Amidohydrolase 3; K07047
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_260
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

280440..282206
DNA (1767bp) protein (589aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEA42668.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEA42668.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHB3_FLUTR
scnpilot_p_inoc_scaffold_14_curated_261
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

282264..282896
DNA (633bp) protein (211aa)
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.-); K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHB8_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_262
unknown

Not on your lists

282900..283388
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_14_curated_263
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(283393..284754)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036984C4
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_264
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(285030..285899)
DNA (870bp) protein (290aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG75_FLUTR
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor
RNA polymerase, sigma 70 subunit, RpoD subfamily {ECO:0000313|EMBL:AEA44710.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_14_curated_265
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

286207..287529
DNA (1323bp) protein (441aa)
Extracellular solute-binding protein family 3 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE14_FLUTR
family 3 extracellular solute-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_266
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

287533..288438
DNA (906bp) protein (302aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
tRNA dimethylallyltransferase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXW1_SOLCM
tRNA isopentenyltransferase MiaA
scnpilot_p_inoc_scaffold_14_curated_267
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

288435..289076
DNA (642bp) protein (214aa)
ABC transporter related protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE16_FLUTR
ABC transporter-like protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_268
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

289073..290251
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE17_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45581.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_14_curated_269
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

290314..291849
DNA (1536bp) protein (512aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE18_FLUTR
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEA45582.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_14_curated_270
unknown

Not on your lists

comp(291885..292772)
DNA (888bp) protein (296aa)

This feature has no annotations

Displaying items 241-270 of 497 in total

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