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scnpilot_p_inoc_scaffold_14_curated_264

Organism: scnpilot_dereplicated_Flavobacteriia_1

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(285030..285899)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG75_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 289.0
  • Bit_score: 479
  • Evalue 2.10e-132
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 289.0
  • Bit_score: 479
  • Evalue 6.50e-133
RNA polymerase, sigma 70 subunit, RpoD subfamily {ECO:0000313|EMBL:AEA44710.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 289.0
  • Bit_score: 479
  • Evalue 2.90e-132

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Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 870
ATGAGACAACTGAAAATCGTAAAACAAGTAACCAACCGTGAAACGGCTTCATTAGATAAATATCTGCAGGAGATCGGGCGTGAGCAGATGATTACTGCCGATGAAGAAGTGGAGCTGGCTCAGCGTATAAAAAATGGGGACAGGAGAGCTTTGGAGCGCCTGACCAGAGCCAATCTGCGTTTTGTCGTTTCAGTTGCCAAACAATATCAGAATCAGGGATTAACACTTCCGGATTTAATTAATGAAGGAAATTTAGGACTGATAAAAGCGGCGGAACGGTTCGATGAAACCCGTGGCTTTAAATTTATTTCGTATGCTGTCTGGTGGATCCGCCAGTCGATTTTGCAGGCATTGGCTGAACAGGCACGGATAGTGCGCCTGCCATTAAATAAGATCGGGACGATTAATAAAATTAACCGTGCTTATTCAGAATTAGAACAAAAATATGAGCGTCCCCCGACTGCAGATGAGCTTGCTGAATTTCTGGGGGTTATGGTGGATGATGTCAAACAGTCAATGGCAAATAACGGACGGCATGTATCGATGGATGCACCTTTGTCGGAAGGAGACGAAAGTTCTTCCACAATGTATGATGTTTTACCCAATACTTACATGAATAATCCTGAAAAAGAGCTGGTGAGCGAATCTCTGAGAAAAGACATTGAACGTTCTCTTTCTACTTTGACAACTAGAGAAGGTGAAGTGGTGAGAATGTTTTACGGCCTGAACGGTAAATACCCGCTGACATTGGAAGAGATCGGGGAGCAATTTGACCTCACAAGAGAACGTGTCCGCCAGATTAAAGAAAAAGCAATCCGCAGATTGAAGCATACTTCAAGAAGCAAGATATTGAAAAGTTATCTGGGATAA
PROTEIN sequence
Length: 290
MRQLKIVKQVTNRETASLDKYLQEIGREQMITADEEVELAQRIKNGDRRALERLTRANLRFVVSVAKQYQNQGLTLPDLINEGNLGLIKAAERFDETRGFKFISYAVWWIRQSILQALAEQARIVRLPLNKIGTINKINRAYSELEQKYERPPTADELAEFLGVMVDDVKQSMANNGRHVSMDAPLSEGDESSSTMYDVLPNTYMNNPEKELVSESLRKDIERSLSTLTTREGEVVRMFYGLNGKYPLTLEEIGEQFDLTRERVRQIKEKAIRRLKHTSRSKILKSYLG*