ggKbase home page

scnpilot_p_inoc_scaffold_71_curated

Search features with annotation key words

Displaying items 181-210 of 257 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_71_curated_181
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(190829..191197)
DNA (369bp) protein (123aa)
Putative transcriptional regulator n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUX4_SOLCM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFD07674.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_71_curated_182
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

191278..192156
DNA (879bp) protein (293aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUX5_SOLCM
putative nucleoside-diphosphate sugar epimerase
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AFD07675.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_71_curated_183
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(192225..193283)
DNA (1059bp) protein (353aa)
alcohol dehydrogenase; K13979 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-]
Mannitol dehydrogenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NUH5_9SPHI
Hydroxyacid dehydrogenase {ECO:0000313|EMBL:ETZ22579.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_p_inoc_scaffold_71_curated_184
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(193320..193733)
DNA (414bp) protein (138aa)
hypothetical protein; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0I8_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CCB86732.1}; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
scnpilot_p_inoc_scaffold_71_curated_185
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

194054..194953
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WVM2_9PORP
Transcriptional regulator {ECO:0000313|EMBL:KIC94343.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_71_curated_186
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(195386..196297)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SDF3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO93838.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
lipoprotein precursor
scnpilot_p_inoc_scaffold_71_curated_187
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

196600..197163
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11V65_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG58701.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
scnpilot_p_inoc_scaffold_71_curated_188
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

197357..198124
DNA (768bp) protein (256aa)
Metallo-beta-lactamase domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G411_9SPHI
Metallo-beta-lactamase {ECO:0000313|EMBL:KFF15371.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
beta-lactamase domain-containing protein
scnpilot_p_inoc_scaffold_71_curated_189
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

198149..198589
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RRN4_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16690.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_71_curated_190
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(198599..199048)
DNA (450bp) protein (150aa)
Acetyltransferase, GNAT family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G3G6_9SPHI
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEI90171.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
acetyltransferase, N-acetylglutamate synthase
scnpilot_p_inoc_scaffold_71_curated_191
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(199173..200582)
DNA (1410bp) protein (470aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEY6_FLAJ1
RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABQ06243.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_71_curated_192
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(200582..203737)
DNA (3156bp) protein (1052aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEW6_FLAJ1
Multidrug transporter AcrB {ECO:0000313|EMBL:KFF16608.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hydrophobe/amphiphile efflux-1 (HAE1) family protein
scnpilot_p_inoc_scaffold_71_curated_193
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(203772..204851)
DNA (1080bp) protein (360aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEW7_FLAJ1
RND transporter {ECO:0000313|EMBL:KFF16607.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_71_curated_194
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(205078..205827)
DNA (750bp) protein (250aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W291_DYAFD
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACT92064.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_71_curated_195
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(205802..207052)
DNA (1251bp) protein (417aa)
Signal transduction histidine kinase, LytS n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W292_DYAFD
Sensor histidine kinase {ECO:0000313|EMBL:CDT00023.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
signal transduction histidine kinase LytS
scnpilot_p_inoc_scaffold_71_curated_196
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(207080..207922)
DNA (843bp) protein (281aa)
UspA domain-containing protein n=1 Tax=Flavobacterium sp. F52 RepID=J1AJQ5_9FLAO
UspA domain-containing protein {ECO:0000313|EMBL:EJG02529.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
UspA domain-containing protein
scnpilot_p_inoc_scaffold_71_curated_197
Prevotella nigrescens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(208163..208780)
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Prevotella nigrescens RepID=L9PVN1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELX66892.1}; TaxID=702439 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella nigrescens F0103.;"
hypothetical protein
scnpilot_p_inoc_scaffold_71_curated_198
unknown

Not on your lists

209211..209375
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_71_curated_199
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

209399..209635
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:BAP29436.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
scnpilot_p_inoc_scaffold_71_curated_200
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

209969..210379
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUX7_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU05985.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_p_inoc_scaffold_71_curated_201
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

210434..211849
DNA (1416bp) protein (472aa)
Regulatory protein GntR HTH n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUX8_PEDHD
GntR family transcriptional regulator
Regulatory protein GntR HTH {ECO:0000313|EMBL:ACU05986.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_p_inoc_scaffold_71_curated_202
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

212067..213305
DNA (1239bp) protein (413aa)
Exonuclease SbcD n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CFP0_9FLAO
Nuclease SbcCD subunit D {ECO:0000313|EMBL:KGO79963.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
nuclease SbcCD subunit D; K03547 exonuclease SbcD
scnpilot_p_inoc_scaffold_71_curated_203
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

213307..217044
DNA (3738bp) protein (1246aa)
ATPase involved in DNA repair n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KC35_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF12908.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
SMC domain-containing protein; K03546 exonuclease SbcC
scnpilot_p_inoc_scaffold_71_curated_204
unknown

Not on your lists

comp(217302..217469)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_71_curated_205
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

217936..218121
DNA (186bp) protein (62aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QBH6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ETZ24649.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_p_inoc_scaffold_71_curated_206
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

218148..218477
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHL0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM35036.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein
scnpilot_p_inoc_scaffold_71_curated_207
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(218584..218955)
DNA (372bp) protein (124aa)
DoxX family protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CC09_SPHS2
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ADZ81582.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_71_curated_208
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(218982..219422)
DNA (441bp) protein (147aa)
Activator of Hsp90 ATPase 1 family protein n=3 Tax=Elizabethkingia RepID=H0KW32_9FLAO
ATPase {ECO:0000313|EMBL:KFC37988.1}; TaxID=238 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica (Chryseobacterium meningosepticum).;"
Activator of Hsp90 ATPase 1 family protein
scnpilot_p_inoc_scaffold_71_curated_209
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(219457..219960)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=A3I259_9BACT
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_71_curated_210
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

220444..220779
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE64 RepID=S1DC89_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOV56475.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
Displaying items 181-210 of 257 in total

View Taxonomy