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scnpilot_p_inoc_scaffold_71_curated_201

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 210434..211849

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein GntR HTH n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUX8_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 471.0
  • Bit_score: 799
  • Evalue 2.50e-228
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 471.0
  • Bit_score: 799
  • Evalue 7.90e-229
Regulatory protein GntR HTH {ECO:0000313|EMBL:ACU05986.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 471.0
  • Bit_score: 799
  • Evalue 3.50e-228

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1416
ATGCCGAAAGAAGCCTTATATCAAAAAATTGCCCATACTGTTGAAGCCCAGATTGCTTCCGAAACATTAAAAATTGGCGATAAACTGCCTTCTATCCGCACGGTACAAAAAATTTACAATGTCAGTCTAAACACTGTAAAGCAGGCTTTTCTGGAACTGGAAAGCAAATCACTGATAGAATCCCGGCCAAAATCGGGTTATTATGTGAGCAATACCTTTAACCGGAAATTTTCCATTCCGGAAACCAGTAAACCCAGGCTGTTTGAAAAAGAGGATCATCCGGAAGATTTAATCAGCAAGGTTTTTAATACCCTGCATCACAAAGAAATTACCCAGTTTTCACTGGGTGTACCGGACAACAGTATGCTGCCCATTGCCAAACTGAATAAAAGTGTCCTGAAAGCGATGCGAAGTCTGGACGACAGCGGAACCGGATATGATATTATTCCCGGCAATACAAACCTCCGGCGCAATATTTCAAAATGGTCTTTTGTGTGGGGCGGTTCGCTAACGGAAAACGATATTATAACCACTTCCGGCACGCTGAATGCTATTTACTTATGCCTGATGGCGGTTACCAAACCGGGAGATACGATTGCACTGGAAAGCCCGATCTATTTTGGCATACTGCAAATGATACAATCCCTCGGACTAAAAGTCATTGAGCTGCCTACCAATCCGGTAACCGGCATTGATGTGGATGCACTTAAAAAAGTGTTACCCAAAATACAGGCCTGCTGCCTGGTAAGCAATTTCAATAACCCGCTAGGCAGCTGTATGCCGGACGAGAACAAAAAAGCCGTAGTCAAAATGCTTACCGAATACAATATTCCGCTAATTGAGGATGATTTATACGGAGATCTGTTTTTTGGCACCAGCCGCCCTGCTCCCTGCAAACTGTATGACGAAGCGGGTATCGTTATGTGGTGCGGTTCTTTTTCGAAAACCCTGGCACCCGGCTACCGGGTTGGCTGGGTAGCCCCCGGAAAGTTTAAAGAAAAAGTGATGCGGAAAAAACTGTTGCAAACCATATCCACACCGCCTTTATTTCAGGAGGTTGTAGCCGATTTTATGGAACATGGCCGGTATGACCTTCACCTTCGCAACCTGAGAAATACGCTGCACACCAATTGCCTGCAATACCAGCGGGCTATTGAAACCTATTTCCCGGATAATACCAAAGCCGCACAGCCACAGGGTGGTTTTGTATTGTGGCTGGAACTGGACAAACGTATCGATACCGCTCTGCTGTATGAACAGGCAATGCAGCAGAATATCAGCTTTGCACCCGGCAGAATGTTCACGCAGCACAACCAGTTTAATAACTGTATGCGGCTGAATTTTGCCCTAAAATGGGATGAAAAACTGGAATATGATTTGAAACGCCTCGGGAATATCGTGAAGAAAGCATTGTAA
PROTEIN sequence
Length: 472
MPKEALYQKIAHTVEAQIASETLKIGDKLPSIRTVQKIYNVSLNTVKQAFLELESKSLIESRPKSGYYVSNTFNRKFSIPETSKPRLFEKEDHPEDLISKVFNTLHHKEITQFSLGVPDNSMLPIAKLNKSVLKAMRSLDDSGTGYDIIPGNTNLRRNISKWSFVWGGSLTENDIITTSGTLNAIYLCLMAVTKPGDTIALESPIYFGILQMIQSLGLKVIELPTNPVTGIDVDALKKVLPKIQACCLVSNFNNPLGSCMPDENKKAVVKMLTEYNIPLIEDDLYGDLFFGTSRPAPCKLYDEAGIVMWCGSFSKTLAPGYRVGWVAPGKFKEKVMRKKLLQTISTPPLFQEVVADFMEHGRYDLHLRNLRNTLHTNCLQYQRAIETYFPDNTKAAQPQGGFVLWLELDKRIDTALLYEQAMQQNISFAPGRMFTQHNQFNNCMRLNFALKWDEKLEYDLKRLGNIVKKAL*