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scnpilot_p_inoc_scaffold_667_curated

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Displaying items 31-49 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_667_curated_31
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(31782..32735)
DNA (954bp) protein (318aa)
transketolase, central region; K00615 transketolase [EC:2.2.1.1]
transketolase n=1 Tax=Flavobacterium rivuli RepID=UPI00035D42D3
Transketolase {ECO:0000313|EMBL:KGO92352.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
scnpilot_p_inoc_scaffold_667_curated_32
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(32778..33626)
DNA (849bp) protein (283aa)
transketolase domain-containing protein; K00615 transketolase [EC:2.2.1.1]
transketolase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI000364F40B
Strain DSM 12611 Contig01, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54837.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
scnpilot_p_inoc_scaffold_667_curated_33
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33804..35006
DNA (1203bp) protein (401aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTN6_PEDHD
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU03672.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_p_inoc_scaffold_667_curated_34
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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35146..36276
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SVV7_9FLAO
scnpilot_p_inoc_scaffold_667_curated_35
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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36310..37386
DNA (1077bp) protein (359aa)
Putative permease n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SQ21_9FLAO
Putative permease {ECO:0000313|EMBL:ESU28559.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
scnpilot_p_inoc_scaffold_667_curated_36
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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37373..38260
DNA (888bp) protein (296aa)
Putative permease n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8X5_9FLAO
Permease {ECO:0000313|EMBL:KGO94025.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
scnpilot_p_inoc_scaffold_667_curated_37
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38333..39286
DNA (954bp) protein (318aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium
acetyl-CoA carboxylase carboxyltransferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FLH4_9FLAO
scnpilot_p_inoc_scaffold_667_curated_38
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

39430..40977
DNA (1548bp) protein (516aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLB0_9FLAO
Replicative DNA helicase {ECO:0000313|EMBL:ESU27052.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
scnpilot_p_inoc_scaffold_667_curated_39
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

41064..42329
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SPC0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU28553.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
scnpilot_p_inoc_scaffold_667_curated_40
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

42558..42890
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G3B4_ECHVK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA80724.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_p_inoc_scaffold_667_curated_41
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42903..43538
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FLG8_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA10510.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_667_curated_42
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

43531..44328
DNA (798bp) protein (266aa)
Histidine kinase n=1 Tax=Flavobacterium sp. CF136 RepID=J2S5Q7_9FLAO
Histidine kinase {ECO:0000313|EMBL:KIA92725.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_667_curated_43
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

44340..45023
DNA (684bp) protein (228aa)
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIX22247.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
Two-component system response regulatory protein, LuxR family
Two-component system response regulatory protein, LuxR family id=2440091 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
scnpilot_p_inoc_scaffold_667_curated_44
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

45101..46012
DNA (912bp) protein (304aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
glsA; Glutaminase (EC:3.5.1.2); K01425 glutaminase [EC:3.5.1.2]
Glutaminase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZ52_9FLAO
scnpilot_p_inoc_scaffold_667_curated_45
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46024..46977)
DNA (954bp) protein (318aa)
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
rlmF; Ribosomal RNA large subunit methyltransferase F (EC:2.1.1.181); K06970 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
Ribosomal RNA large subunit methyltransferase F n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S4X7_9FLAO
scnpilot_p_inoc_scaffold_667_curated_46
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(47127..47471)
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=2 Tax=Flavobacterium RepID=V6SPJ4_9FLAO
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
scnpilot_p_inoc_scaffold_667_curated_47
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(47575..47772)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X7H3_FLACA
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
scnpilot_p_inoc_scaffold_667_curated_48
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47938..48348)
DNA (411bp) protein (137aa)
translation initiation factor IF-3 n=1 Tax=Myroides injenensis RepID=UPI0002885A48
Translation initiation factor IF-3 {ECO:0000313|EMBL:KGO79113.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
translation initiation factor IF-3; K02520 translation initiation factor IF-3
scnpilot_p_inoc_scaffold_667_curated_49
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48519..50465)
DNA (1947bp) protein (649aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
thrS; Threonine--tRNA ligase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonine--tRNA ligase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XU92_FLAIG
Displaying items 31-49 of 49 in total

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