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scnpilot_p_inoc_scaffold_667_curated_46

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(47127..47471)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=2 Tax=Flavobacterium RepID=V6SPJ4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 114.0
  • Bit_score: 221
  • Evalue 5.30e-55
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 114.0
  • Bit_score: 224
  • Evalue 8.70e-56
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 114.0
  • Bit_score: 213
  • Evalue 4.50e-53

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Taxonomy

Flavobacterium suncheonense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 345
ATGCCAAGATCAGTAAATTCAGTTGCTTCAAGAGCTAGAAGAAAAAGAGTATTGAAGCAAGCCAAAGGATTCTTTGGAAGACGTAAAAACGTTTGGACAGTAGCGAAAAACGCGGTAGAAAAAGCAATGCAATATGCTTACCGTGGCAGAAAGCAAAAAAAGAGAAATTTCCGTGCATTATGGATTATGCGTATTAACGCTGGTGCACGTTTACACGGAATGAGTTATTCTCAATTCATGGGTAAAGTAAAAGCTAACAACATCGAATTGAACCGTAAAGTTCTTGCCGATTTAGCAATGAATCATCCAGAAGCTTTTGCAGCTATTGTAAATAGAGTTAAATAA
PROTEIN sequence
Length: 115
MPRSVNSVASRARRKRVLKQAKGFFGRRKNVWTVAKNAVEKAMQYAYRGRKQKKRNFRALWIMRINAGARLHGMSYSQFMGKVKANNIELNRKVLADLAMNHPEAFAAIVNRVK*