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scnpilot_p_inoc_scaffold_492_curated_99

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 95845..96798

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 317.0
  • Bit_score: 611
  • Evalue 5.40e-172
rpoA; DNA-directed RNA polymerase alpha subunit RpoA (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 317.0
  • Bit_score: 602
  • Evalue 5.60e-170
DNA-directed RNA polymerase alpha subunit RpoA n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SGN4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 317.0
  • Bit_score: 608
  • Evalue 3.20e-171

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Taxonomy

Flavobacterium suncheonense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 954
ATGATCGATTCAACCGATTTTGAAGGTAAATTTGAATTTAGACCTTTAGAACCGGGATATGGATTGACTGTTGGTAACGCATTAAGACGTGTTTTGCTTTCTTCTTTAGAAGGATATGCAATCACTTCGGTTCGTATTGAAGGAGTGGATCACGAATTCTCTACAATATCAGGAGTGGTTGAAGATGTAACAGAAATTATATTGAATCTTAAACAAGTACGTTTCAAACGTCAGATCGAAGATATCGATAACGAATCTGTTTCTATCTCTTTTTCAGGTAAGGATCAATTGACAGCTGGAGATTTTCAAAAGTTTATCTCTGGTTTTCAGGTACTAAACCCGGATTTGGTTATCTGCAACCTTGATAGCAAAATTACCATAAACATGGAATTAACTATTGAGAAAGGTCGTGGTTACGTTCCTGCAGAAGAAAACAAAAAACAAAACGCACCTATAGGAACTATTTTTACAGATTCTATTTACACACCAGTAAAGAACGTAAAATATTCAATAGAAAATTTCCGTGTTGAGCAAAAAACTGACTACGAAAAATTAGTTTTTGAAATCATTACAGATGGTTCTATTCACCCTAAAGATGCATTAACAGAAGCAGCTAAAACGTTGATTCATCACTTTATGTTGTTCTCTGACGAAAGAATTACACTTGAGGCTGATGAAATTGCACAAACAGAGTCGTATGATGAAGAGTCATTACATATGAGACAATTGCTTAAAACTAAGCTTGTTGATATGGACTTATCTGTAAGAGCATTAAATTGTTTAAAAGCGGCTGAAGTTGATACACTTGGCGATTTAGTATCATTTAATAAAAATGATCTGATGAAGTTCCGTAATTTCGGTAAAAAATCATTAACAGAACTTGATGAATTAGTTGCTGTTAAAGGTCTTACTTTCGGGATGGATTTAACTAAATATAAATTAGATAAAGAATAA
PROTEIN sequence
Length: 318
MIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGYAITSVRIEGVDHEFSTISGVVEDVTEIILNLKQVRFKRQIEDIDNESVSISFSGKDQLTAGDFQKFISGFQVLNPDLVICNLDSKITINMELTIEKGRGYVPAEENKKQNAPIGTIFTDSIYTPVKNVKYSIENFRVEQKTDYEKLVFEIITDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEIAQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFGKKSLTELDELVAVKGLTFGMDLTKYKLDKE*