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scnpilot_p_inoc_scaffold_451_curated_3

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(5180..9478)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 999.99
  • Bit_score: 2703
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase beta' subunit RpoC; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 999.99
  • Bit_score: 2632
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9Z7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 999.99
  • Bit_score: 2703
  • Evalue 0.0

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Taxonomy

Flavobacterium enshiense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4299
ATGACGAGATTAAAAGATAAAAATACCGTTAAAAGATTTAACAAAATTTCGATAGGACTTGCTTCCCCGGAATCCATTCTGGCAGAATCAAGAGGTGAGGTTTTAAAACCGGAAACCATCAACTATCGTACACACAAACCAGAGCGTGACGGTCTTTTCTGCGAAAGAATTTTCGGTCCAGTAAAAGATTTCGAATGTGCTTGTGGTAAATACAAAAGAATCCGTTATAAAGGAATCGTTTGTGACCGTTGTGGAGTTGAAGTTACGGAGAAAAAAGTACGTAGAGACAGAGTTGGACACATCAATTTGGTGGTGCCTATCGCTCATATCTGGTATTTCCGTTCCCTTCCAAACAAAATTGGTTACATTCTAGGCTTGCCGTCTAAGAAATTAGACATGATTATTTACTACGAAAGATATGTAGTAATTCAACCGGGTATTGCTAAAAATCCAGAAGGAGAAACTTTAAACCGATTAGACTTCTTAACTGAAGAAGAGTATTTGAATATTTTAGATACCCTTCCGATGGAGAATCAATATTTAGATGATACAGATCCGAATAAATTCATCGCTAAGATGGGTGCGGAATGTATTATGGATTTATTGGCACGTACAGATTTAGATGCTTTGTCTTACGACCTGCGTCACGCTGCTAATAATGAAACATCAAAACAACGTAAAACAGAAGCTTTAAAAAGACTTCAGGTTGTAGAATCGTTCCGTGAAGCAAACAATAACAGAGAAAACCGTCCGGAATGGATGATTTTAAAAGTAATCCCGGTTATTCCGCCGGAATTACGTCCGTTAGTGCCGCTTGATGGAGGTCGTTTCGCAACATCGGATTTAAATGATTTGTACCGAAGAGTAATCATCCGTAACAACCGTTTAAAACGATTAATGGAAATTAAAGCTCCGGAAGTAATCTTAAGAAACGAAAAACGTATGTTACAGGAATCTGTAGACTCGTTATTCGATAACACAAGAAAAGCTTCTGCTGTTAAAACAGAATCAAACAGACCATTAAAATCCCTTTCGGATTCCTTAAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTATTAGGTAAACGTGTGGATTATTCTGCCCGTTCGGTAATTGTTGTTGGACCGGAAATGAAATTGTTCGAATGTGGTCTGCCTAAAGATATGGCTGCGGAACTGTACAAACCATTCGTTATTCGTAAATTAATCGAAAGAGGAATTGTTAAAACAGTGAAGTCGGCTAAGAAAATTATCGACAAAAAAGAGCCGGTAGTTTGGGATATCCTTGAAAACGTAATTAAAGGACACCCGGTACTGCTAAACCGTGCTCCTACTTTGCACAGATTAGGTATCCAGGCATTCCAGCCAAAATTGATTGAAGGTAAAGCGATCCAGTTACACCCGTTAGTGTGTACGGCGTTTAATGCCGATTTCGATGGTGACCAGATGGCGGTTCACTTACCATTAGGACCGGAAGCTATTTTGGAAGCACAATTATTAATGTTGGCTTCACACAATATCTTGAACCCTGCAAATGGTGCGCCAATCACGGTACCTTCTCAGGACATGGTTTTGGGTCTGTATTACATGACCAAAGAACGTTTGTCTACTCCGGATCATAAAATTTTAGGTGAAGGCCTGACTTTTTACTCGGCAGAAGAAGTAAATATTGCTTTGAATGAAGGGAAATTAGAGTTGAATGCCCGTGTTAAAATCAGAGCAAAAGACTTTAATGAAAACGGAGAATTAGTATATAAAATTATCCAGACTACTGCAGGTAGAGTATTATTTAACGAAGTAGTACCGGAAGCAGCTGGTTATATAAATGAAGTATTAACGAAGAAGTCCTTAAGAGATATTATTGGTAAAATTTTAAGTGTTACCAATGTACCTACTACTGCTGCCTTCTTGGATAATATGAAAGATATGGGATACCGTTTCGCTTTCAGAGGAGGACTTTCTTTCTCTTTAGGGGATATCAAAATTCCAGATCAGAAACAAGACCTTATTGCGGATGCAAACGGTCAGGTTGAAGCGATTTCGATGAACTATAACATGGGTCTTATTACTAATAATGAGCGTTACAACCAGGTTATTGACGTTTGGACTTCAACCAATGCATTGCTTACAGAATTAGCGATGAAAAACATTAGAGAAGACCAGCAAGGATTCAACTCGGTGTATATGATGCTTGACTCTGGAGCGAGGGGATCTAAAGAACAGATTCGTCAGTTAACCGGTATGCGTGGTTTGATGGCTAAGCCTAAAAAATCAACCGCTGGTGGTGGTGAAATTATTGAAAACCCGATTTTATCGAACTTTAAAGAAGGACTTTCAATTTTAGAATACTTTATTTCTACTCACGGTGCTCGTAAAGGTCTTGCGGATACGGCTCTTAAAACGGCAGATGCCGGGTACTTAACCAGAAGATTACATGACGTTTCTCAGGATGTTATTGTAAACTCTGTAGATTGTGGTACTTTAAGAGGTGTTGAAGTATCAGCATTGAAAAAGAATGAGGAAGTTGTTGAAACTTTAGGAGAAAGAATCTTAGGACGTGTTGCGTTACAAGATGTAATCAATCCTTTAACCAGCGAAATTTTAGTTCACGCAGGTGATGAAATTACAGAAGCTATCGTTAAAGCTATTGACGCTTCTCCAATTGAAAGAGTAGACGTTCGTTCTCCGTTAACTTGTGAAGCTGGAAAAGGTATCTGTGCAAAATGTTACGGACGTAACCTGGCAACAGGTAAAATGACCCAGAGAGGTGAAGCAGTAGGAGTTATTGCAGCACAGTCTATTGGTGAGCCGGGTACACAGTTAACACTACGTACATTCCACGTTGGGGGTACAGCAGGTAACATTTCTGAAGAATCAAGTATCATTACGAAATTCAAAGGAAGACTTGAAATCGAAGATTTAAAAACTGTTAAAGGAGAAGACAATGAAGGTAATGCTATCGATATTGTAATTTCCCGTTCAACAGAATTAAAATTAGTAGACGAAACAACAGGAATTGTATTAAATACACATAATATCCCTTACGGATCAAGCATCTTTGTTAAAGATGGTGAAGTAGTAGATAAAGGAACTACAATCTGTAAATGGGACCCGTATAATGGTGTAATTATTTCAGAATTTACAGGTAAGGTGGCTTACGAAGATATCGAACAGGGACAATCGTTCATGGTTGAAATCGATGAGCAAACCGGATTCCAGGAAAAAGTAATCTCTGAAGCCAGAAATAAAAAATTAATTCCTACTTTATTAATCTACGGAAAAGACGGAGAATTAATCCGTTCTTACAACTTACCGGTGGGTGCCCACCTTATGGTTGATGACGGAGAGAAAATTAAAGCAGGTAAGATTTTAGTAAAAATCCCTCGTCGTTCTTCAAAAGCAGGGGATATTACAGGAGGTTTACCAAGAATTACCGAGTTGTTAGAAGCTCGTAATCCTTCAAACCCGGCTGTAGTATCTGAGATTGACGGTGTAGTATCTTTTGGAAAAATCAAAAGAGGTAACCGTGAGATCGTTGTAGAATCTAAATTTGGTGAGATTAAGAAATACTTAGTTAAACTTTCAAACCAGATCTTAGTTCAGGAAAATGACTACGTAAGAGCAGGTATGCCACTATCTGACGGAGCAATTACTCCGGATGATATCTTAAGAATCCAGGGACCATCTGCTGTACAACAGTACTTGGTAAATGAAATTCAGGAAGTGTACCGTTTACAAGGGGTAAAAATTAATGACAAGCACTTTGAAGTTGTAATTCGTCAGATGATGCGTAAAGTTCAAATCCAGGATCCGGGTGATACACTATTCTTAGAAGATCAGTTGGCTCATACAAGTGACTTTATCGTTGAAAATGATAAATTATACGGAATGAAAGTTGTGGAAGATGCGGGTGATTCTGATAACCTGAAAGCAGGTCAGATCATATCGCCAAGAGAATTAAGAGATGAAAACTCTTTACTGAAGAGAAATGACAGAAACCTTGTAGTTGCAAGAGATGTGGTTCCGGCAACGGCTACTCCGATTCTTCAGGGTATTACAAGAGCGTCATTACAAACGAAATCGTTTATCTCGGCAGCATCGTTCCAGGAAACAACGAAAGTATTGAATGAAGCAGCTGTAGCTGGTAAAGTTGACGGATTAGAAGGATTGAAAGAAAATGTTATTGTGGGTCACAGAATCCCTGCTGGTACAGGTATGAGAGATTACGATAATATTATTGTAGGTTCTAAAGAAGAATTCAACGAATTAATGGCTGCAAAAGAAGAATTTAATTACTAA
PROTEIN sequence
Length: 1433
MTRLKDKNTVKRFNKISIGLASPESILAESRGEVLKPETINYRTHKPERDGLFCERIFGPVKDFECACGKYKRIRYKGIVCDRCGVEVTEKKVRRDRVGHINLVVPIAHIWYFRSLPNKIGYILGLPSKKLDMIIYYERYVVIQPGIAKNPEGETLNRLDFLTEEEYLNILDTLPMENQYLDDTDPNKFIAKMGAECIMDLLARTDLDALSYDLRHAANNETSKQRKTEALKRLQVVESFREANNNRENRPEWMILKVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLMEIKAPEVILRNEKRMLQESVDSLFDNTRKASAVKTESNRPLKSLSDSLKGKQGRFRQNLLGKRVDYSARSVIVVGPEMKLFECGLPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIIDKKEPVVWDILENVIKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHLPLGPEAILEAQLLMLASHNILNPANGAPITVPSQDMVLGLYYMTKERLSTPDHKILGEGLTFYSAEEVNIALNEGKLELNARVKIRAKDFNENGELVYKIIQTTAGRVLFNEVVPEAAGYINEVLTKKSLRDIIGKILSVTNVPTTAAFLDNMKDMGYRFAFRGGLSFSLGDIKIPDQKQDLIADANGQVEAISMNYNMGLITNNERYNQVIDVWTSTNALLTELAMKNIREDQQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSTAGGGEIIENPILSNFKEGLSILEYFISTHGARKGLADTALKTADAGYLTRRLHDVSQDVIVNSVDCGTLRGVEVSALKKNEEVVETLGERILGRVALQDVINPLTSEILVHAGDEITEAIVKAIDASPIERVDVRSPLTCEAGKGICAKCYGRNLATGKMTQRGEAVGVIAAQSIGEPGTQLTLRTFHVGGTAGNISEESSIITKFKGRLEIEDLKTVKGEDNEGNAIDIVISRSTELKLVDETTGIVLNTHNIPYGSSIFVKDGEVVDKGTTICKWDPYNGVIISEFTGKVAYEDIEQGQSFMVEIDEQTGFQEKVISEARNKKLIPTLLIYGKDGELIRSYNLPVGAHLMVDDGEKIKAGKILVKIPRRSSKAGDITGGLPRITELLEARNPSNPAVVSEIDGVVSFGKIKRGNREIVVESKFGEIKKYLVKLSNQILVQENDYVRAGMPLSDGAITPDDILRIQGPSAVQQYLVNEIQEVYRLQGVKINDKHFEVVIRQMMRKVQIQDPGDTLFLEDQLAHTSDFIVENDKLYGMKVVEDAGDSDNLKAGQIISPRELRDENSLLKRNDRNLVVARDVVPATATPILQGITRASLQTKSFISAASFQETTKVLNEAAVAGKVDGLEGLKENVIVGHRIPAGTGMRDYDNIIVGSKEEFNELMAAKEEFNY*