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scnpilot_p_inoc_scaffold_451_curated_4

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(9548..13360)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 999.99
  • Bit_score: 2470
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 999.99
  • Bit_score: 2404
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZH3_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 999.99
  • Bit_score: 2470
  • Evalue 0.0

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Taxonomy

Flavobacterium cauense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3813
ATGTTAACAAATCAGACTGAAAGATTAAATTTCGCCTCGACGAAAAACATCCCTGATTACCCGGATTTTTTAGATATTCAGGTAAAATCTTTTAAAGATTTCTTCCAATTGGAAACTAAATCTGACGAAAGAGGCAACGAAGGTCTTTATAATACCTTCATGGAAAACTTCCCAATTACAGATACAAGAAATCAGTTTGTATTGGAATTCCTTGATTACTTTGTTGATCCACCACGTTATACAATTGAAGAATGTATTGACAGAGGGTTGACGTACAGTGTGCCTTTAAAAGCACGTTTAAAACTGTATTGTACAGACCCGGAACATGAAGATTTTGAAACAATTGTTCAGGATGTATATTTAGGTACAATACCATACATGACACCAAGCGGTACTTTCGTTATCAACGGTGCCGAGCGTGTTGTAGTATCTCAGTTACACCGTTCACCGGGTGTATTCTTCGGACAATCTTTCCATGCGAATGGTACAAAATTATACTCTGCCAGAGTAATTCCTTTTAAAGGATCTTGGATTGAATTTGCTACCGATATCAATAGCGTTATGTATGCTTATATCGATAGAAAGAAAAAATTACCGGTAACAACTCTTTTCCGTGCTATCGGATTTGAAAGAGATAAAGATATTCTAGAGATTTTTGACCTTGCAGAAGAAATCAAAGTTTCTAAAACAGGTCTTAAAAAGTACATCGGAAGAAGACTTGCTGCGCGTGTTCTGAACACCTGGCATGAAGATTTCGTTGATGAGGATACTGGAGAAGTAGTATCAATTGAACGTAATGAAATTATCTTGGATCGTGATACGATTTTAGATAAAGACAATGTAGAGGAAATTATTGATGCGAACGTTAAAGCTATTTTGTTACACAAAGAAGATAACAATCAGGCTGATTACGCTATTATCCACAATACATTACAAAAAGACCCGACAAACTCAGAAAAAGAAGCTGTAGAGCACATTTACCGTCAGTTGCGTAACGCAGAACCGCCTGATGAGGAAACGGCTCGTGGTATTATCGATAAATTATTCTTCTCCGATCAACGTTACAACTTAGGTGAAGTTGGTCGTTACAGAATGAATAAAAAATTAGGTTTGGATATCCCAATGGAAAAACAGGTTTTGACCAAAGAGGATATCATTACAATCGTAAAATATTTAATCGAATTGATCAACTCTAAAGCAGAGATTGATGATATCGATCACTTATCAAACCGTCGTGTTAGAACAGTTGGAGAACAATTGTCGGCACAATTTGGTGTAGGACTTGCCCGTATGGCAAGAACAATCAGAGAAAGAATGAACGTTAGAGATAACGAGGTGTTTACACCAATTGATTTGATCAATGCCAAAACATTGTCATCAGTAATCAACTCTTTCTTTGGAACCAACCAGTTATCTCAGTTCATGGACCAAACGAATCCACTGGCCGAGATTACACACAAAAGAAGATTGTCTGCCCTTGGACCAGGAGGTCTTTCCAGAGAAAGAGCCGGATTCGAGGTACGTGACGTTCACTATACACACTACGGACGTTTATGTCCTATTGAAACACCGGAGGGACCAAACATTGGTTTGATTTCATCTCTTGGAGTATATGCAAAAGTGAATGGAATGGGATTCATTGAAACTCCTTACCGTAAAGTAACGGAAGGTAAAGTGGATTTGGTTTCTACTCCGATCTATTTAAGTGCAGAAGAAGAAGAAGGAAAAATGATTGCTCAGGCAAACATTGATATGGATGAAAACGGAACCATCACCGCTGACAGAGTTATTGCTCGTGAAGAAGGAGATTTCCCTGTGGTTGAGCCAGGAGTTGTAGATTATACAGACGTTGCGCCAAACCAGATTGCATCCATTTCGGCTTCATTAATTCCGTTCTTGGAGCACGATGATGCGAACCGTGCATTGATGGGATCAAACATGATGCGTCAGGCAGTTCCATTATTGCGTCCGGAAGCACCAATTGTTGGTACAGGATTAGAGCGTCAGGTGGCGTCTGATTCCAGAGTACTGATCAATGCTGAAGGTAGCGGAACTGTTGAATATGTTGATGCGAACATGATTACCATCAAATACGACAGAACCGATGCGGAAAGAGCAGTTAGTTTCGATCCGGATGAAAAAACATACCAGTTAATCAAATTCAGAAAAACCAACCAGAGTACTTCTATCAACCTGAAACCAATCGTAAGAAGAGGAGACAGAGTTGCAAAAGGACAGGTACTTTGTGAAGGTTATGCAACGCAAAACGGAGAGCTGGCTTTAGGTAGAAACCTTAAAGTTGCCTTCATGCCTTGGAAAGGGTATAACTTCGAGGATGCGATTGTAATTTCTGAAAAAGTTGTTCGTGATGACATCTTTACATCCATTCACGTGGATGACTATTCACTGGAAGTAAGAGATACAAAATTAGGTAACGAAGAGTTAACGAATGATATCCCTAACGTAAGTGAAGAGGCAACTAAAGATTTAGATGAAAACGGTATGATTAGAATTGGTGCAGAGGTAAAACCTGGCGACATTCTAATCGGAAAAATTACACCAAAAGGAGAATCAGATCCTACTCCGGAAGAGAAATTATTAAGAGCGATCTTCGGGGATAAAGCAGGTGATGTTAAAGATGCTTCATTAAAAGCGTCTCCTTCATTACACGGTGTGGTTTTAGATAAAAAATTATTCGCAAGAGCGGTTAAAGATAAACGTAAACGTTCTAAAGATAAAGATGATTTAGCAGTTTTAGAAACACAATTTGAAGTGAAATTCAATGAATTGAAAGACAGATTGGTAGAGAAATTGTTTGATATCGTGAATGGAAAAACATCTCAGGGTGTTATGAATGATTTGGGAGAAGAAGTATTGCCAAAAGGTAAAAAATACTCTCAAAAAATGTTGTATGCTGTTGAAGATTTCGCACACTTAACAAAAGGACAGTGGACTACAGACGATGAAACCAATGCAATGGTGAACGACCTGATCCACAACTATAAAATTAAGTTGAATGACCTTCAGGGAGCATTGAGAAGAGAGAAATTTACAATCACTGTTGGAGATGAATTACCATCAGGAATTTTAAAACTGGCTAAAGTTTATATCGCTAAGAAACGTAAACTGAAAGTTGGGGATAAAATGGCGGGACGTCACGGAAATAAAGGTATCGTTGCGAAAATTGTTCGTCACGAAGACATGCCTTTCTTAGAAGACGGAACTCCTGTAGATATCGTATTGAATCCACTTGGTGTACCATCGCGTATGAACATCGGGCAGATTTATGAAACTGTTCTTGGATGGGCAGGTCAGAAACTAGGTAAGAAATTTGCAACGCCAATTTTTGATGGAGCTTCTTTAGAGCAAATCAATGCTTTAACAGACGAAGCAGGTATTCCTAGATTCGGTCATACTTACCTGTATGACGGAGGAACAGGAGACCGTTTCCACCAGCCGGCGACTGTAGGTATCATCTACATGTTGAAATTAGGACACATGGTTGATGATAAAATGCACGCACGTTCTATCGGTCCATACTCATTAATTACGCAACAGCCATTAGGAGGTAAAGCACAATTCGGTGGTCAGCGTTTTGGAGAGATGGAGGTTTGGGCTCTTGAGGCTTATGGAGCATCAAGTACACTAAGAGAAATCTTGACTGTTAAATCGGATGACGTTATTGGTAGAGCGAAAACTTACGAAGCTATCGTTAAGGGAGAAACTATGCCGGAACCAGGATTACCGGAATCATTCAATGTATTAATGCATGAATTGAAAGGTCTTGGATTAGACATCAGATTAGAAGAATAA
PROTEIN sequence
Length: 1271
MLTNQTERLNFASTKNIPDYPDFLDIQVKSFKDFFQLETKSDERGNEGLYNTFMENFPITDTRNQFVLEFLDYFVDPPRYTIEECIDRGLTYSVPLKARLKLYCTDPEHEDFETIVQDVYLGTIPYMTPSGTFVINGAERVVVSQLHRSPGVFFGQSFHANGTKLYSARVIPFKGSWIEFATDINSVMYAYIDRKKKLPVTTLFRAIGFERDKDILEIFDLAEEIKVSKTGLKKYIGRRLAARVLNTWHEDFVDEDTGEVVSIERNEIILDRDTILDKDNVEEIIDANVKAILLHKEDNNQADYAIIHNTLQKDPTNSEKEAVEHIYRQLRNAEPPDEETARGIIDKLFFSDQRYNLGEVGRYRMNKKLGLDIPMEKQVLTKEDIITIVKYLIELINSKAEIDDIDHLSNRRVRTVGEQLSAQFGVGLARMARTIRERMNVRDNEVFTPIDLINAKTLSSVINSFFGTNQLSQFMDQTNPLAEITHKRRLSALGPGGLSRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLGVYAKVNGMGFIETPYRKVTEGKVDLVSTPIYLSAEEEEGKMIAQANIDMDENGTITADRVIAREEGDFPVVEPGVVDYTDVAPNQIASISASLIPFLEHDDANRALMGSNMMRQAVPLLRPEAPIVGTGLERQVASDSRVLINAEGSGTVEYVDANMITIKYDRTDAERAVSFDPDEKTYQLIKFRKTNQSTSINLKPIVRRGDRVAKGQVLCEGYATQNGELALGRNLKVAFMPWKGYNFEDAIVISEKVVRDDIFTSIHVDDYSLEVRDTKLGNEELTNDIPNVSEEATKDLDENGMIRIGAEVKPGDILIGKITPKGESDPTPEEKLLRAIFGDKAGDVKDASLKASPSLHGVVLDKKLFARAVKDKRKRSKDKDDLAVLETQFEVKFNELKDRLVEKLFDIVNGKTSQGVMNDLGEEVLPKGKKYSQKMLYAVEDFAHLTKGQWTTDDETNAMVNDLIHNYKIKLNDLQGALRREKFTITVGDELPSGILKLAKVYIAKKRKLKVGDKMAGRHGNKGIVAKIVRHEDMPFLEDGTPVDIVLNPLGVPSRMNIGQIYETVLGWAGQKLGKKFATPIFDGASLEQINALTDEAGIPRFGHTYLYDGGTGDRFHQPATVGIIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGASSTLREILTVKSDDVIGRAKTYEAIVKGETMPEPGLPESFNVLMHELKGLGLDIRLEE*