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scnpilot_p_inoc_scaffold_451_curated

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_451_curated_1
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..4720)
DNA (4719bp) protein (1573aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SSF2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO97092.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
scnpilot_p_inoc_scaffold_451_curated_2
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4866..5174)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XVV8_FLAIG
Uncharacterized protein {ECO:0000313|EMBL:KGO87024.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
scnpilot_p_inoc_scaffold_451_curated_3
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5180..9478)
DNA (4299bp) protein (1433aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
rpoC; DNA-directed RNA polymerase beta' subunit RpoC; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9Z7_9FLAO
scnpilot_p_inoc_scaffold_451_curated_4
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9548..13360)
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZH3_9FLAO
scnpilot_p_inoc_scaffold_451_curated_5
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13621..13989)
DNA (369bp) protein (123aa)
50S ribosomal protein L7 n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B735DA
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
scnpilot_p_inoc_scaffold_451_curated_6
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(14053..14550)
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9W6_9FLAO
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
scnpilot_p_inoc_scaffold_451_curated_7
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(14573..15262)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=3 Tax=Flavobacterium RepID=V6RYJ2_9FLAO
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
scnpilot_p_inoc_scaffold_451_curated_8
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(15281..15718)
DNA (438bp) protein (146aa)
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
50S ribosomal protein L11 id=2678281 bin=GWF1_Flavobacteria_32_7 species=unknown genus=Myroides taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
scnpilot_p_inoc_scaffold_451_curated_9
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15782..16333)
DNA (552bp) protein (184aa)
Transcription antitermination protein NusG n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMC6_9FLAO
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
nusG; Transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG
scnpilot_p_inoc_scaffold_451_curated_10
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16344..16586)
DNA (243bp) protein (81aa)
Protein translocase subunit SecE n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X5Q0_FLACA
preprotein translocase, SecE subunit; K03073 preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
scnpilot_p_inoc_scaffold_451_curated_11
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16684..17871)
DNA (1188bp) protein (396aa)
Elongation factor Tu n=2 Tax=Flavobacterium RepID=V6S9W1_9FLAO
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
tuf; Elongation factor Tu (EF-Tu); K02358 elongation factor Tu
scnpilot_p_inoc_scaffold_451_curated_12
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18407..18709)
DNA (303bp) protein (101aa)
Ribosome hibernation protein YhbH n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMW5_9FLAO
Ribosome hibernation protein YhbH {ECO:0000313|EMBL:ESU27764.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
sigma 54 modulation protein/ribosomal protein S30EA; K05808 putative sigma-54 modulation protein
scnpilot_p_inoc_scaffold_451_curated_13
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18730..19638)
DNA (909bp) protein (303aa)
Integrase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6STM2_9FLAO
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
xerC; tyrosine recombinase XerC; K03733 integrase/recombinase XerC
scnpilot_p_inoc_scaffold_451_curated_14
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19990..20589)
DNA (600bp) protein (200aa)
Two-component system response regulatory protein, LuxR family n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6F0_FLABF
LuxR family transcriptional regulator
Two-component system response regulatory protein, LuxR family {ECO:0000313|EMBL:CCB70972.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
scnpilot_p_inoc_scaffold_451_curated_15
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20605..22566)
DNA (1962bp) protein (654aa)
two component system sensor histidine kinase (EC:2.7.13.3)
Two-component system sensor histidine kinase {ECO:0000313|EMBL:CCB70973.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCB70973.1};; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
Two-component system sensor histidine kinase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6F1_FLABF
scnpilot_p_inoc_scaffold_451_curated_16
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22638..23210
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6F2_FLABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB70974.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
scnpilot_p_inoc_scaffold_451_curated_17
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23261..24175
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z0P9_FLABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB70975.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
scnpilot_p_inoc_scaffold_451_curated_18
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24209..26383
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JXM2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EZH71305.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
subtilisin-like serine protease
scnpilot_p_inoc_scaffold_451_curated_19
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26473..27615)
DNA (1143bp) protein (381aa)
acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Myroides RepID=H1ZCQ6_MYROD
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGO94362.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
scnpilot_p_inoc_scaffold_451_curated_20
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27632..28516)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZU3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU19547.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_451_curated_21
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28528..28755)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SB34_9FLAO
PspC family transcriptional regulator {ECO:0000313|EMBL:KGO86503.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
scnpilot_p_inoc_scaffold_451_curated_22
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28813..30135)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMW8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27769.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
scnpilot_p_inoc_scaffold_451_curated_23
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30141..31826
DNA (1686bp) protein (562aa)
Peptide-N-glycosidase F like protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZF4_9FLAO
Peptide-N-glycosidase F like protein {ECO:0000313|EMBL:ESU19544.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_451_curated_24
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31873..33234)
DNA (1362bp) protein (454aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22]
Cysteine synthase id=2678319 bin=GWF1_Flavobacteria_32_7 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
Cystathionine beta-synthase {ECO:0000313|EMBL:AEW86904.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
scnpilot_p_inoc_scaffold_451_curated_25
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33317..35224)
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SB31_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO88852.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
scnpilot_p_inoc_scaffold_451_curated_26
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35388..36410)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9X6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGD69520.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
scnpilot_p_inoc_scaffold_451_curated_27
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36431..37213)
DNA (783bp) protein (261aa)
Uncharacterized protein {ECO:0000313|EMBL:KGD69519.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
scnpilot_p_inoc_scaffold_451_curated_28
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37228..38730)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U7K5_CROAH
Uncharacterized protein {ECO:0000313|EMBL:KGD69518.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
scnpilot_p_inoc_scaffold_451_curated_29
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38743..41856)
DNA (3114bp) protein (1038aa)
Outer membrane protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SME0_9FLAO
Outer membrane protein {ECO:0000313|EMBL:ESU27776.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
outer membrane protein
scnpilot_p_inoc_scaffold_451_curated_30
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42055..42654
DNA (600bp) protein (200aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
ribonuclease H (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4]
RnhB protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYH3_9FLAO
Displaying items 1-30 of 65 in total

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