name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_p_inoc_scaffold_2130_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..107)
|
Ribosome biogenesis GTPase A n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ5_9BURK
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
GTP-binding protein; K14540 ribosome biogenesis GTPase A
|
|
scnpilot_p_inoc_scaffold_2130_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
246..728
|
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91634.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_2130_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(749..2317)
|
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-Rule:MF_00578}; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_00578}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
gshA2; glutamate--cysteine ligase GshA (EC:6.3.2.2)
Glutamate--cysteine ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ3_9BURK
|
|
scnpilot_p_inoc_scaffold_2130_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2352..3338)
|
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dihydrouridine synthase; K05541 tRNA-dihydrouridine synthase C [EC:1.-.-.-]
tRNA-dihydrouridine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ2_9BURK
|
|
scnpilot_p_inoc_scaffold_2130_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3397..4062
|
Pseudouridine synthase {ECO:0000313|EMBL:EIK91631.1}; EC=5.4.99.12 {ECO:0000313|EMBL:EIK91631.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rluA; ribosomal large subunit pseudouridine synthase A (EC:4.2.1.70); K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Pseudouridine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ1_9BURK
|
|
scnpilot_p_inoc_scaffold_2130_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4089..4865
|
Short-chain dehydrogenase/reductase sdr n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ0_9BURK
Short-chain dehydrogenase/reductase sdr {ECO:0000313|EMBL:EIK91630.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
short-chain dehydrogenase/reductase SDR
|
|
scnpilot_p_inoc_scaffold_2130_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4940..6124
|
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIK91628.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EIK91628.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Acetyl-CoA acetyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY8_9BURK
|
|
scnpilot_p_inoc_scaffold_2130_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6133..7320
|
Lipase/esterase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY7_9BURK
Lipase/esterase {ECO:0000313|EMBL:EIK91627.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
beta-lactamase
|
|
scnpilot_p_inoc_scaffold_2130_curated_9
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7504..8040
|
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KXQ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGI75332.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_2130_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8069..8965)
|
Class I cytochrome c n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY5_9BURK
Class I cytochrome c {ECO:0000313|EMBL:EIK91625.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
class I cytochrome c
|
|
scnpilot_p_inoc_scaffold_2130_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9068..9805)
|
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY2_9BURK
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIK91622.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
|
|
scnpilot_p_inoc_scaffold_2130_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9912..10811)
|
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY1_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK91621.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
LysR family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_2130_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10817..11380)
|
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91620.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_2130_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11474..12007
|
Cupin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX9_9BURK
Cupin {ECO:0000313|EMBL:EIK91619.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cupin 2 barrel-domain containing protein
|
|
scnpilot_p_inoc_scaffold_2130_curated_15
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12102..12971
|
membrane protein n=1 Tax=Acidovorax avenae RepID=UPI0002DCDD25
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
|
|
scnpilot_p_inoc_scaffold_2130_curated_16
unknown
|
Not on your lists |
12983..13744
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_2130_curated_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13729..14232
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH30_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98771.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_2130_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14385..15128)
|
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91617.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative biofilm formation/stress response factor
|
|
scnpilot_p_inoc_scaffold_2130_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15230..16060
|
Integral membrane protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX6_9BURK
Integral membrane protein {ECO:0000313|EMBL:EIK91616.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_2130_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16061..16423)
|
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91615.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
|
|
scnpilot_p_inoc_scaffold_2130_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16420..16719)
|
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91614.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
|
|
scnpilot_p_inoc_scaffold_2130_curated_22
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16716..18437)
|
long-chain-fatty-acid--CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] id=5079471 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
long-chain-fatty-acid--CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
scnpilot_p_inoc_scaffold_2130_curated_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18661..19698
|
Extracellular solute-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX2_9BURK
Extracellular solute-binding protein {ECO:0000313|EMBL:EIK91612.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
extracellular solute-binding protein; K09969 general L-amino acid transport system substrate-binding protein
|
|
scnpilot_p_inoc_scaffold_2130_curated_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19804..20982
|
Amino acid ABC transporter permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX1_9BURK
Amino acid ABC transporter permease {ECO:0000313|EMBL:EIK91611.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
amino acid ABC transporter permease; K09970 general L-amino acid transport system permease protein
|
|
scnpilot_p_inoc_scaffold_2130_curated_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20988..22091
|
Amino acid ABC transporter permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX0_9BURK
Amino acid ABC transporter permease {ECO:0000313|EMBL:EIK91610.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
amino acid ABC transporter permease; K09971 general L-amino acid transport system permease protein
|
|
scnpilot_p_inoc_scaffold_2130_curated_26
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22101..22853
|
ABC transporter-like protein {ECO:0000313|EMBL:EIK91609.1}; EC=3.6.3.27 {ECO:0000313|EMBL:EIK91609.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter-like protein; K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-]
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQW9_9BURK
|
|
scnpilot_p_inoc_scaffold_2130_curated_27
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22932..23681
|
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EIK91608.1}; EC=3.1.4.- {ECO:0000313|EMBL:EIK91608.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQW8_9BURK
|