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scnpilot_p_inoc_scaffold_5307_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_5307_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..2648)
DNA (2646bp) protein (882aa)
Putative transmembrane multidrug-efflux system lipoprotein transmembrane n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIZ3_9BURK
Putative transmembrane multidrug-efflux system lipoprotein transmembrane {ECO:0000313|EMBL:EIK89183.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transmembrane multidrug-efflux system lipoprotein transmembrane
scnpilot_p_inoc_scaffold_5307_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2661..3851)
DNA (1191bp) protein (397aa)
Transmembrane multidrug efflux system transmembrane protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIZ2_9BURK
Transmembrane multidrug efflux system transmembrane protein {ECO:0000313|EMBL:EIK89182.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transmembrane multidrug efflux system transmembrane protein
scnpilot_p_inoc_scaffold_5307_curated_3
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3995..4492)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6YA19_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO78923.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
putative cytochrome c precursor
scnpilot_p_inoc_scaffold_5307_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4751..5479
DNA (729bp) protein (243aa)
Rna sigma 28 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIZ1_9BURK
Rna sigma 28 {ECO:0000313|EMBL:EIK89181.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
sigma 28 (flagella/sporulation); K02405 RNA polymerase sigma factor for flagellar operon FliA
scnpilot_p_inoc_scaffold_5307_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5532..6803
DNA (1272bp) protein (424aa)
Transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIY5_9BURK
Transporter {ECO:0000313|EMBL:EIK89175.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transporter
scnpilot_p_inoc_scaffold_5307_curated_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(6819..7370)
DNA (552bp) protein (184aa)
Dihydrofolate reductase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D7X3_SINAD
dihydrofolate reductase
Dihydrofolate reductase {ECO:0000313|EMBL:AGA24955.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_5307_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7525..8352
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIY3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89173.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_5307_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8442..9212
DNA (771bp) protein (257aa)
GntR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIY2_9BURK
GntR family transcriptional regulator {ECO:0000313|EMBL:EIK89172.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_5307_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9209..9886
DNA (678bp) protein (226aa)
Class II aldolase/adducin family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIX9_9BURK
Class II aldolase/adducin family protein {ECO:0000313|EMBL:EIK89169.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
class II aldolase/adducin family protein
scnpilot_p_inoc_scaffold_5307_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9927..10910
DNA (984bp) protein (328aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIX7_9BURK
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIK89167.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NAD-dependent epimerase/dehydratase
Displaying 10 items

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