ggKbase home page

scnpilot_p_inoc_scaffold_3524_curated_7

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 5713..6315

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein, TetR id=3964598 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 193.0
  • Bit_score: 216
  • Evalue 3.00e-53
lmrA; regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 191.0
  • Bit_score: 180
  • Evalue 4.30e-43
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 149.0
  • Bit_score: 270
  • Evalue 1.40e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGTCCAGCACCAAACCGGCCCGATCGCCCCGATCCGACAACCGACTGCCGGAGCTGCTGGATGCCGCGGCGCGCCTCTTTGCCCGCCGCGGGTACGCCGCGACGTCCATGCGGGACATCGCCGTCGAAATCAAGATGCTGCCGGGCTCGCTCTACTACCACTTCCCTTCCAAGGAAGACCTGCTGCTCGCGGTGTACCAGGCCGGCGTGATCGAACTGGAAAAGGCGGCCACCGAAGCCGTGGCGAAGGAGACCGATCCCTGGGACCGCCTGGAGGCGATGTGCAAGGCGCACCTGGAGACCGTCTTGCGCGACAGCGACTACGCCCAGGTCCTGATCCGTGTGTTGCCCGATGACATTCCGCAGGCCGCGGACCGCTTGCGGGAGCTGCGGGACAGCTACGAGCAGGTCTTTCGCCAGGTCGTGGCGCAGCTGCCCCTGCCGGCGGGGACCGACCGGCGCGCCCTGCGCCTGATGCTCATGGGCGCGCTCAACTGGGCGACCCTGTGGTTCAACCCGGACGGCCGCGATTCACCGCGCGTGCTGGCGCGCAAGTTCGTGGGCCTGGTGAGGGAGGCGCAAGGCAGCCGGGCCCCCGCCTAG
PROTEIN sequence
Length: 201
MSSTKPARSPRSDNRLPELLDAAARLFARRGYAATSMRDIAVEIKMLPGSLYYHFPSKEDLLLAVYQAGVIELEKAATEAVAKETDPWDRLEAMCKAHLETVLRDSDYAQVLIRVLPDDIPQAADRLRELRDSYEQVFRQVVAQLPLPAGTDRRALRLMLMGALNWATLWFNPDGRDSPRVLARKFVGLVREAQGSRAPA*