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scnpilot_p_inoc_scaffold_3524_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3524_curated_1
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18..464)
DNA (447bp) protein (149aa)
Transcriptional regulator n=1 Tax=Herbaspirillum sp. CF444 RepID=J2M3H6_9BURK
Transcriptional regulator, MarR family {ECO:0000313|EMBL:BAO29026.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
MarR family transcription regulator protein
scnpilot_p_inoc_scaffold_3524_curated_2

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583..1527
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS615 RepID=UPI00037E820A
Uncharacterized protein {ECO:0000313|EMBL:KKN92915.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TIM-barrel fold metal-dependent hydrolase
scnpilot_p_inoc_scaffold_3524_curated_3
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1557..2543
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037481FF
Uncharacterized protein {ECO:0000313|EMBL:EJE54054.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
extra-cytoplasmic solute receptor
scnpilot_p_inoc_scaffold_3524_curated_4
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2627..3613
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI000344C1C7
hemolysin D; K01993 HlyD family secretion protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_p_inoc_scaffold_3524_curated_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3610..4515
DNA (906bp) protein (302aa)
Uncharacterized protein id=1262166 bin=GWE1_Burkholderiales_65_30 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_3524_curated_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4512..5645
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036969C9
hypothetical protein; K09686 antibiotic transport system permease protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_3524_curated_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5713..6315
DNA (603bp) protein (201aa)
Regulatory protein, TetR id=3964598 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
lmrA; regulatory protein TetR
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_3524_curated_8
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6312..7025)
DNA (714bp) protein (238aa)
TetR family transcriptional regulator n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PLE9_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:AHB04144.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_3524_curated_9
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7084..7905
DNA (822bp) protein (274aa)
Class II aldolase/adducin family protein n=1 Tax=Frankia sp. CN3 RepID=G6H6I8_9ACTO
Aldolase {ECO:0000313|EMBL:KGD95272.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
aldolase
scnpilot_p_inoc_scaffold_3524_curated_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7938..8912
DNA (975bp) protein (325aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003759A74
TRAP dicarboxylate transporter subunit DctP
Tax=GWE1_Burkholderiales_65_30_curated
scnpilot_p_inoc_scaffold_3524_curated_11
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8909..9436
DNA (528bp) protein (176aa)
Tripartite ATP-independent periplasmic transporter, DctQ component n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12HD6_POLSJ
tripartite ATP-independent periplasmic transporter DctQ
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:ABE42056.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
scnpilot_p_inoc_scaffold_3524_curated_12
unknown

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9424..9540
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 12 items

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