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scnpilot_p_inoc_scaffold_3524_curated_8

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(6312..7025)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PLE9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 232.0
  • Bit_score: 252
  • Evalue 4.40e-64
TetR family transcriptional regulator {ECO:0000313|EMBL:AHB04144.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 232.0
  • Bit_score: 252
  • Evalue 6.20e-64
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 188.0
  • Bit_score: 155
  • Evalue 1.80e-35

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGTCTACTCGAACGCCTTCCGACAATTCAGTGGCTGAAAGCAAGAGACCGCGCGGGCGCACGCGCAGCAAGGAGGCCGAAGAGGCGGTGCTGGATGCCGCCTATGCCCTGCTGTCGGAGCACGGCCTGCAGGCCACGACGGTCGATGCCATCGCGGCCCGGTCGAAGGTGAGCAAGGCCACCATCTACAAGTGGTGGCCCAACCGCGCCGCGATCATCATGTCGGCCTTCCGGCGCGAGTCGCTGGTGGCGATCCCCTATCCCGATCGGCTGTCGCTGGACGTGGTGATCGACCGGCTGCTCAACATGAGCGAGCAGTTCCGAGGCCCCCTGGGGCGCATGATGGCCGCGCTGATCGCGGAAGGGCAGTCCGACCCGGCGCTGGCCGAGGCGTTTCGCGAAGGCTATATCCGGGCCCGGCGCGAGGAAGGTGTTCGCATCGTCAAGTCCAGCATCGCCGATGGCACCGTGCGCAACGCCGACCCGGAGGTCATCCTGGACGTGCTCTATGCCCCGCTGTACTACCGCCTGCTCGTGGGCCACCAGACCCTGACGCCGAAGTTCGTGCGCGAGTACCTCGACCTCGCCATGCACGGCGTGCTGAGCGAGAACGTCAAGCTCGACGCGGTCCGGGCCAAGAAGCCGGCGAAACCACCAAAAAAGGGCCAGGACACGAAGGCGCCCGCCGCGCGCGCGGGCACCCGCTCCTCCTAG
PROTEIN sequence
Length: 238
MSTRTPSDNSVAESKRPRGRTRSKEAEEAVLDAAYALLSEHGLQATTVDAIAARSKVSKATIYKWWPNRAAIIMSAFRRESLVAIPYPDRLSLDVVIDRLLNMSEQFRGPLGRMMAALIAEGQSDPALAEAFREGYIRARREEGVRIVKSSIADGTVRNADPEVILDVLYAPLYYRLLVGHQTLTPKFVREYLDLAMHGVLSENVKLDAVRAKKPAKPPKKGQDTKAPAARAGTRSS*