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scnpilot_p_inoc_scaffold_444_curated

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Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_444_curated_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..117
DNA (117bp) protein (39aa)
Ammonium transport protein (Amt family) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F7Q1_9PROT
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
amtB; transporter of Ammonium AmtB; K03320 ammonium transporter, Amt family
scnpilot_p_inoc_scaffold_444_curated_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176..493)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TU18_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM74125.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(576..746)
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6EZC6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK97583.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_444_curated_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(905..1483)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TU21_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM74128.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_444_curated_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1524..2921)
DNA (1398bp) protein (466aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Putative signal transduction histidine kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EWC8_9PROT
putative signal transduction histidine kinase
scnpilot_p_inoc_scaffold_444_curated_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2918..3658)
DNA (741bp) protein (247aa)
Two-component transcriptional regulator, winged helix family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TUC0_9PROT
DNA-binding two component response transcriptional regulator (OmpR family) {ECO:0000313|EMBL:CDK97586.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
two-component response transcriptional regulator (OmpR family)
scnpilot_p_inoc_scaffold_444_curated_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3832..4185
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EWV8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK97587.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_444_curated_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4247..5320
DNA (1074bp) protein (358aa)
Putative lysophospholipase L1 and related esterases n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZD0_9PROT
Putative lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CDK97588.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5369..6043
DNA (675bp) protein (225aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUB7_9PROT
scnpilot_p_inoc_scaffold_444_curated_10
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6030..7331
DNA (1302bp) protein (434aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase (HDH) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EWD3_9PROT
scnpilot_p_inoc_scaffold_444_curated_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7331..7804
DNA (474bp) protein (158aa)
UPF0262 protein MGR_0229 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUG2_9PROT
UPF0262 protein MGMSRv2__0376 {ECO:0000256|HAMAP-Rule:MF_00678}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7811..8257
DNA (447bp) protein (149aa)
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CAM74268.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CAM74268.1};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Low molecular weight phosphotyrosine protein phosphatase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUG1_9PROT
protein-tyrosine-phosphatase
scnpilot_p_inoc_scaffold_444_curated_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8344..8562
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUG0_9PROT
translation initiation factor 1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_444_curated_14
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8575..9168
DNA (594bp) protein (198aa)
Maf-like protein MGR_0226 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUF9_9PROT
Maf-like protein MGMSRv2__0379 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
nucleotide-binding protein implicated in inhibition of septum formation; K06287 septum formation protein
scnpilot_p_inoc_scaffold_444_curated_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9158..10468
DNA (1311bp) protein (437aa)
ribonuclease; K08301 ribonuclease G [EC:3.1.26.-]
Ribonucleases G and E n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TUF8_9PROT
Ribonucleases G and E {ECO:0000313|EMBL:CAM74265.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_444_curated_16
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10465..10659
DNA (195bp) protein (65aa)
DNA gyrase inhibitor YacG n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUF7_9PROT
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein; K09862 hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_17
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10631..11350
DNA (720bp) protein (240aa)
AzlC-like n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TUF6_9PROT
AzlC-like {ECO:0000313|EMBL:CAM74263.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
AzlC-like protein
scnpilot_p_inoc_scaffold_444_curated_18
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11343..11684
DNA (342bp) protein (114aa)
Membrane protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUF5_9PROT
Putative branched-chain amino acid transport {ECO:0000313|EMBL:CDK97598.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
branched-chain amino acid transport
scnpilot_p_inoc_scaffold_444_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11942..13504
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035D4209
Site-specific recombinase XerD {ECO:0000313|EMBL:KFC75617.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phage integrase family recombinase
scnpilot_p_inoc_scaffold_444_curated_20
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13587..14309)
DNA (723bp) protein (241aa)
ParB-like nuclease n=1 Tax=Microvirga sp. WSM3557 RepID=I4YT97_9RHIZ
ParB-like nuclease {ECO:0000313|EMBL:EIM27189.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_21
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14309..14971)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPE0_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL62232.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_p_inoc_scaffold_444_curated_22
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15050..18226)
DNA (3177bp) protein (1059aa)
Type I site-specific deoxyribonuclease HsdR n=1 Tax=Idiomarina baltica OS145 RepID=A3WKQ5_9GAMM
DEAD/DEAH box helicase {ECO:0000313|EMBL:AHY42527.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
HsdR family type I site-specific deoxyribonuclease
scnpilot_p_inoc_scaffold_444_curated_23
Morococcus cerebrosus, Morococcus, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18223..18834)
DNA (612bp) protein (204aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC12660.1}; TaxID=1056807 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Morococcus.;" source="Morococcus cerebrosus.;"
scnpilot_p_inoc_scaffold_444_curated_24
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18831..19646)
DNA (816bp) protein (272aa)
type I restriction-modification system specificity subunit; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Type I restriction-modification system specificity subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKB6_ANADE
Type I restriction-modification system specificity subunit {ECO:0000313|EMBL:ABC82098.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
scnpilot_p_inoc_scaffold_444_curated_25
Idiomarina baltica, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20159..21715)
DNA (1557bp) protein (519aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72]
N-6 DNA methylase n=1 Tax=Idiomarina baltica OS145 RepID=A3WKQ7_9GAMM
N-6 DNA methylase {ECO:0000313|EMBL:EAQ32569.1}; TaxID=314276 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina baltica OS145.;"
scnpilot_p_inoc_scaffold_444_curated_26
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21779..22462)
DNA (684bp) protein (228aa)
Resolvase, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47D48_DECAR
Resolvase, N-terminal {ECO:0000313|EMBL:CCQ72544.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
resolvase, N-terminal
scnpilot_p_inoc_scaffold_444_curated_27
Bartonella tamiae, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22499..23473)
DNA (975bp) protein (325aa)
Uncharacterized protein n=2 Tax=Bartonella tamiae RepID=J0R1L9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJF89419.1}; TaxID=1094558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella tamiae Th239.;"
hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_28
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23931..25379
DNA (1449bp) protein (483aa)
Outer membrane efflux protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TX46_9PROT
Outer membrane efflux protein {ECO:0000313|EMBL:CAM75203.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Outer membrane protein
scnpilot_p_inoc_scaffold_444_curated_29
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25354..27390
DNA (2037bp) protein (679aa)
Putative ABC transporter ATP binding protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0F0_9PROT
Putative ABC transporter ATP binding protein {ECO:0000313|EMBL:CDK98939.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
ABC-type protease/lipase transport system, ATPase and permease components
scnpilot_p_inoc_scaffold_444_curated_30
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27387..28745
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F383_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98938.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
membrane-fusion protein
Displaying items 1-30 of 80 in total

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