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scnpilot_p_inoc_scaffold_444_curated

Search features with annotation key words

Displaying items 61-80 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_444_curated_61
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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63368..64657
DNA (1290bp) protein (430aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0B8_9PROT
scnpilot_p_inoc_scaffold_444_curated_62
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64744..66795
DNA (2052bp) protein (684aa)
Putative serine/threonine protein kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F348_9PROT
Putative serine/threonine protein kinase {ECO:0000313|EMBL:CDK98903.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_63
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66802..67296
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0I7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98902.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_64
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67342..68208)
DNA (867bp) protein (289aa)
RNA polymerase sigma factor RpoH n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVV0_9PROT
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor
scnpilot_p_inoc_scaffold_444_curated_65
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68345..69328)
DNA (984bp) protein (328aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
pseudouridylate synthase, 23S RNA-specific; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
23S rRNA pseudouridine synthase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EXG6_9PROT
scnpilot_p_inoc_scaffold_444_curated_66
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69379..69702
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVV2_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM74759.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_444_curated_67
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69699..70169
DNA (471bp) protein (157aa)
Putative CysO-cysteine peptidase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EX96_9PROT
Putative CysO-cysteine peptidase {ECO:0000313|EMBL:CDK97799.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Mov34/MPN/PAD-1
scnpilot_p_inoc_scaffold_444_curated_68
unknown

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70909..71217
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_444_curated_69
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(71227..71643)
DNA (417bp) protein (139aa)
DNA mismatch endonuclease Vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
DNA mismatch endonuclease Vsr n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IIZ2_METNO
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:ACL61787.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_p_inoc_scaffold_444_curated_70
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71705..72673
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B5B247
Putative NotI-like restriction endonuclease {ECO:0000313|EMBL:AHG65488.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_71
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72626..73777)
DNA (1152bp) protein (384aa)
C-5 cytosine-specific family DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
DNA methylase, C-5 cytosine-specific family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LUK5_RUEPO
DNA methylase, C-5 cytosine-specific family {ECO:0000313|EMBL:AAV94349.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
scnpilot_p_inoc_scaffold_444_curated_72
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73868..74203)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0Y1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK99114.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_73
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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74360..75337
DNA (978bp) protein (326aa)
Transposase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QSY9_METTR
Transposase {ECO:0000313|EMBL:KJR64525.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
transposase
scnpilot_p_inoc_scaffold_444_curated_74
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75469..75915)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F478_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK99111.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_75
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76048..76680)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036634B6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL73547.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
scnpilot_p_inoc_scaffold_444_curated_76
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(76778..77386)
DNA (609bp) protein (203aa)
UPI00005B9AC5 related cluster id=2484061 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_64_37
scnpilot_p_inoc_scaffold_444_curated_77
unknown

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comp(77422..78138)
DNA (717bp) protein (239aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_444_curated_78
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(78221..78517)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2MBA3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKF09413.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
hypothetical protein
scnpilot_p_inoc_scaffold_444_curated_79
unknown

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comp(78514..78687)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_444_curated_80
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(78766..78966)
DNA (201bp) protein (67aa)
Prophage CP4-57 regulator n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TXZ4_PHAFV
Prophage CP4-57 regulator {ECO:0000313|EMBL:EPY03230.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
Displaying items 61-80 of 80 in total

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