ggKbase home page

scnpilot_p_inoc_scaffold_444_curated_65

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(68345..69328)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 327.0
  • Bit_score: 555
  • Evalue 4.70e-155
pseudouridylate synthase, 23S RNA-specific; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 325.0
  • Bit_score: 473
  • Evalue 4.00e-131
23S rRNA pseudouridine synthase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EXG6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 327.0
  • Bit_score: 555
  • Evalue 3.40e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
GTGACCGATCCCGCCGATACCATCCTTGCCCCCGCCCCGGTCACCGCCGAGGAAGCGGGCAGCCGCCTGGACAAATGGCTGTCGTCCCGTCTGCCCGACCTGTCGCGTACCCGCATCAAGGGGCTGATCGACGACGGTCGAGTGACGGCGACGGGGCAGACCATAACGGACGCGTCGGCGCGGGTCAAACCCGGCCAGGACTTCGTCGTCTCCATCCCCCCCGACCGCCCCGCCGACCCGATCCCCCAGGACATCCCGCTGTCCATCGCCTATGAGGACGGCGACCTGATCGTCATCGACAAGCCGGCCGGCTTGGTGGTCCACCCTGCTCCCGGCAGCCCCGACCAGACCCTGGTCAACGCGCTTTTGGCCCATTGCGGCGACTCGCTGTCCGGCATCGGCGGGGTCAAGCGCCCTGGCATCGTTCACCGCATCGACAAGGACACCAGCGGCCTGTTGGTGGTGGCCAAGAACGACCGCGCCCATCACGGCCTGGCCGAACAATTCGCCGTCCATTCCCTGGAACGGGTCTATCGCGCCCTGGTGTGGGGGACGCCAGTCCCCAGAGAGGGCGAGATCACCGGCAATATCGGTCGCTCCCCCCAGGACCGCAAAAAAATGGCCATCGTCAGCCACGGCGGCAAACCAGCCCTGACCCGCTACCGGGTCTTGAAAAGCTTCGCCGCCGGCACTGTATCGCTGGTGGAATGCCGACTGGCCACCGGGCGCACCCACCAGATTCGCGTGCACATGACATCCATCGGCCACCCCTTGGTCGGCGACCAGGTTTATGGTCGTTCACGTGCGGCAAAGCTGAAGGCCCTGCCCGACGAAGCCCGCCAGGCCTTGACCAGCTTCCCCCGCCAGGCTTTGCATGCAGCGGTACTCGGATTTAACCATCCGATTTCTGGGGCCTTGCTACGCTTCGAAAGCCATATACCCCTTGATATCAACGAGTTGATCGCCACTCTAGAGTCTGTATGA
PROTEIN sequence
Length: 328
VTDPADTILAPAPVTAEEAGSRLDKWLSSRLPDLSRTRIKGLIDDGRVTATGQTITDASARVKPGQDFVVSIPPDRPADPIPQDIPLSIAYEDGDLIVIDKPAGLVVHPAPGSPDQTLVNALLAHCGDSLSGIGGVKRPGIVHRIDKDTSGLLVVAKNDRAHHGLAEQFAVHSLERVYRALVWGTPVPREGEITGNIGRSPQDRKKMAIVSHGGKPALTRYRVLKSFAAGTVSLVECRLATGRTHQIRVHMTSIGHPLVGDQVYGRSRAAKLKALPDEARQALTSFPRQALHAAVLGFNHPISGALLRFESHIPLDINELIATLESV*