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scnpilot_p_inoc_scaffold_239_curated_2

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 1267..1599

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=2 Tax=Oligotropha carboxidovorans RepID=B6JA74_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 110.0
  • Bit_score: 197
  • Evalue 7.90e-48
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KIC55728.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 110.0
  • Bit_score: 200
  • Evalue 1.00e-48
trbC; putative conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 110.0
  • Bit_score: 197
  • Evalue 2.50e-48

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Taxonomy

Brevundimonas nasdae → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGATCCGCACGCTCGCGCGCGGTTGCCGAGTCTTTGCGACCTCGGCCGCTGCGATTTCCATCAGCATCCTGTTTTCCCAAGCGGCCCACGCGTCCGGCTCGTCCATGCCCTGGGAGGCGCCGCTGCAGTCCATCCTGCAGTCGATCGAAGGCCCCGTCGCCAAGATCATCGCCGTCATCATCATCATCGTCACCGGCCTGACGCTGGCCTTCGGCGATACTTCCGGCGGCTTCCGGCGGCTTATCCAGATCGTCTTCGGCCTGTCGATCGCCTTCGCCGCCAGCTCCTTCTTCCTGTCTTTCTTCTCGTTCGGCGGCGGAGCGCTCGTCTGA
PROTEIN sequence
Length: 111
MIRTLARGCRVFATSAAAISISILFSQAAHASGSSMPWEAPLQSILQSIEGPVAKIIAVIIIIVTGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV*