name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_p_inoc_scaffold_239_curated_1
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
335..1270
|
P-type conjugative transfer ATPase TrbB n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4H4_9BRAD
Conjugal transfer protein TrbB {ECO:0000313|EMBL:KIC55727.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
trbB; P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
|
|
scnpilot_p_inoc_scaffold_239_curated_2
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1267..1599
|
Conjugal transfer protein TrbC n=2 Tax=Oligotropha carboxidovorans RepID=B6JA74_OLICO
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KIC55728.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
trbC; putative conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
|
|
scnpilot_p_inoc_scaffold_239_curated_3
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1599..1880
|
conjugal transfer protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003144824
Conjugal transfer protein {ECO:0000313|EMBL:KIC55729.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3
|
|
scnpilot_p_inoc_scaffold_239_curated_4
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1893..4346
|
AAA ATPase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSC9_PARL1
Conjugal transfer protein TrbE {ECO:0000313|EMBL:KIC55730.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4
|
|
scnpilot_p_inoc_scaffold_239_curated_5
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4349..5116
|
conjugal transfer protein TrbJ n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FC56
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KIC55731.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
conjugal transfer protein TrbJ
|
|
scnpilot_p_inoc_scaffold_239_curated_6
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5415..6770
|
Conjugal transfer protein TrbL n=2 Tax=Oligotropha carboxidovorans RepID=B6JA69_OLICO
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KIC55733.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
trbL; conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
|
|
scnpilot_p_inoc_scaffold_239_curated_7
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6767..7456
|
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JA68_OLICO
Conjugal transfer protein TrbF {ECO:0000313|EMBL:KIC55734.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
trbF1; conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
|
|
scnpilot_p_inoc_scaffold_239_curated_8
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7453..8433
|
Conjugal transfer protein TrbG n=2 Tax=Oligotropha carboxidovorans RepID=B6JA67_OLICO
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KIC55735.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9
|
|
scnpilot_p_inoc_scaffold_239_curated_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8430..9602
|
Conjugal transfer protein TrbI n=2 Tax=Oligotropha carboxidovorans RepID=B6JA66_OLICO
trbI1; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10
Conjugal transfer protein TrbI {ECO:0000313|EMBL:AEI05059.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
scnpilot_p_inoc_scaffold_239_curated_10
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9776..10765)
|
Transcriptional regulator, LysR family n=3 Tax=Oligotropha carboxidovorans RepID=B6JA65_OLICO
LysR family transcriptional regulator {ECO:0000313|EMBL:KIC58072.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
LysR family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_239_curated_11
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10909..11469)
|
zinc-binding dehydrogenase n=1 Tax=Erwinia carotovora RepID=UPI0001A435D3
Zinc-binding dehydrogenase {ECO:0000313|EMBL:KHT30873.1}; TaxID=555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum (Erwinia carotovora; subsp. carotovora).;"
alcohol dehydrogenase
|
|
scnpilot_p_inoc_scaffold_239_curated_12
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11466..12755)
|
Drug resistance transporter Bcr/CflA subfamily n=1 Tax=Rhizobium sp. RepID=L0NND8_RHISP
Drug resistance transporter Bcr/CflA subfamily {ECO:0000313|EMBL:CCF22391.1}; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. NT-26.;"
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
|
|
scnpilot_p_inoc_scaffold_239_curated_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13760..14926)
|
UPI0003CF48C9 related cluster n=2 Tax=unknown RepID=UPI0003CF48C9
transposase; K07486 transposase
rbh
Transposase {ECO:0000313|EMBL:BAB52336.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
|
|
scnpilot_p_inoc_scaffold_239_curated_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15178..16374
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000365F58B
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
scnpilot_p_inoc_scaffold_239_curated_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16384..17646
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003627905
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
scnpilot_p_inoc_scaffold_239_curated_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17639..18364
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036126B2
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
scnpilot_p_inoc_scaffold_239_curated_17
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18420..18872
|
MerR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2JBF3_9PROT
MerR family transcriptional regulator {ECO:0000313|EMBL:EKE67944.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
cueR; DNA-binding transcriptional activator of copper-responsive regulon genes
|
|
scnpilot_p_inoc_scaffold_239_curated_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18869..19087
|
MerR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2JBF3_9PROT
MerR family transcriptional regulator {ECO:0000313|EMBL:EKE67944.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
cation translocating P-type ATPase
|
|
scnpilot_p_inoc_scaffold_239_curated_19
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19886..22342
|
Copper-transporting ATPase CopA {ECO:0000313|EMBL:CEG54771.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CEG54771.1};; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;"
heavy metal-transporting ATPase (EC:3.6.3.-)
Heavy metal-transporting ATPase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2L3_ACIMA
|
|
scnpilot_p_inoc_scaffold_239_curated_20
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria
|
Not on your lists |
22355..22720
|
SnoaL-like polyketide cyclase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A888_DEIPD
SnoaL-like polyketide cyclase
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:AFZ69285.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
|
|
scnpilot_p_inoc_scaffold_239_curated_21
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22832..24061
|
Major facilitator superfamily MFS_1 n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JKB4_OLICO
MFS transporter
MFS transporter {ECO:0000313|EMBL:AEI08251.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
scnpilot_p_inoc_scaffold_239_curated_22
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24497..25186
|
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASF5_METEA
hypothetical protein; K06196 cytochrome c-type biogenesis protein
Uncharacterized protein {ECO:0000313|EMBL:ACS40396.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
|
|
scnpilot_p_inoc_scaffold_239_curated_23
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
25197..25430
|
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASF6_METEA
Uncharacterized protein {ECO:0000313|EMBL:AII54456.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_239_curated_24
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25490..25579
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Signal transduction histidine kinase n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I6Z7X9_PSEST
Signal transduction histidine kinase
|
|
scnpilot_p_inoc_scaffold_239_curated_25
unknown
|
Not on your lists |
comp(26749..28164)
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_239_curated_26
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28161..28847)
|
Winged helix family two component transcriptional regulator n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I7A3W4_PSEST
Transcriptional regulator {ECO:0000313|EMBL:KJB91733.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
winged helix family two component transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_239_curated_27
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28900..29775)
|
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6ETU8_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:KHL25852.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_239_curated_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30119..30856)
|
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI0003823EAF
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
scnpilot_p_inoc_scaffold_239_curated_29
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30850..32205)
|
glycosyl transferase family 1 n=1 Tax=Sphingomonas wittichii RepID=UPI000303EF79
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABQ70147.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
scnpilot_p_inoc_scaffold_239_curated_30
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32685..35870
|
Hydrophobe/amphiphile efflux-1 (HAE1) family protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2Z2_9SPHN
hydrophobe/amphiphile efflux-1 (HAE1) family protein
Hydrophobe/amphiphile efflux-1 (HAE1) family protein {ECO:0000313|EMBL:AGH50400.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|